Gene : Glyma.13G306000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10811//PTHR10811:SF19 - FRINGE-RELATED Genomic Order:  3060
Name:  ? Glyma.13G306000 Secondary Identifier:  ? PAC:30503210
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G306000 0.5kb upstream 0.5kb upstream 2976 true Chr13: 40235520-40238495 Glycine max
Glyma.13G306000 0.5kb upstream 0.5kb upstream 500 false Chr13: 40237996-40238495 Glycine max
Glyma.13G306000 0.5kb downstream 0.5kb downstream 2976 true Chr13: 40235020-40237995 Glycine max
Glyma.13G306000 0.5kb downstream 0.5kb downstream 500 false Chr13: 40235020-40235519 Glycine max
Glyma.13G306000 1.0kb upstream 1.0kb upstream 3476 true Chr13: 40235520-40238995 Glycine max
Glyma.13G306000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40237996-40238995 Glycine max
Glyma.13G306000 1.0kb downstream 1.0kb downstream 3476 true Chr13: 40234520-40237995 Glycine max
Glyma.13G306000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40234520-40235519 Glycine max
Glyma.13G306000 2.0kb upstream 2.0kb upstream 4476 true Chr13: 40235520-40239995 Glycine max
Glyma.13G306000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40237996-40239995 Glycine max
Glyma.13G306000 2.0kb downstream 2.0kb downstream 4476 true Chr13: 40233520-40237995 Glycine max
Glyma.13G306000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40233520-40235519 Glycine max
Glyma.13G306000 5.0kb upstream 5.0kb upstream 7476 true Chr13: 40235520-40242995 Glycine max
Glyma.13G306000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40237996-40242995 Glycine max
Glyma.13G306000 5.0kb downstream 5.0kb downstream 7476 true Chr13: 40230520-40237995 Glycine max
Glyma.13G306000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40230520-40235519 Glycine max
Glyma.13G306000 10.0kb upstream 10.0kb upstream 12476 true Chr13: 40235520-40247995 Glycine max
Glyma.13G306000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40237996-40247995 Glycine max
Glyma.13G306000 10.0kb downstream 10.0kb downstream 12476 true Chr13: 40225520-40237995 Glycine max
Glyma.13G306000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40225520-40235519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121612449 5273 Angiosperm Singleton cluster - no MSA
122246003 5265 Fabidae Singleton cluster - no MSA
123990031 5270 Rosid Singleton cluster - no MSA
123565082 5271 Pentapetalae Singleton cluster - no MSA
122599851 5272 Eudicot Singleton cluster - no MSA
120884672 5274 Embryophyte Singleton cluster - no MSA
122925468 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0124582 0.0 0.0563426 Low Low
cufflinks 0.0727402 0.0 0.291532 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.35587 0.0 4.67115    
cufflinks 1.64078 0.0 5.54277    
cufflinks 2.89272 0.0 9.04718   High
cufflinks 0.499148 0.0 1.84566    
cufflinks 0.048928 0.0 0.199403 Low  
cufflinks 0.346188 0.0 1.30267    
cufflinks 0.254        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.871       High
cufflinks 2.31       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.037     Low  
cufflinks 0.026     Low  
cufflinks 0.018     Low  
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.028     Low  
cufflinks 0.015     Low  
cufflinks 0.021     Low  
cufflinks 0.012     Low  

0 Strain