Gene : Glyma.13G299300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  2993
Name:  ? Glyma.13G299300 Secondary Identifier:  ? PAC:30504749
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G299300 0.5kb upstream 0.5kb upstream 5209 true Chr13: 39757771-39762979 Glycine max
Glyma.13G299300 0.5kb upstream 0.5kb upstream 500 false Chr13: 39757771-39758270 Glycine max
Glyma.13G299300 0.5kb downstream 0.5kb downstream 5209 true Chr13: 39758271-39763479 Glycine max
Glyma.13G299300 0.5kb downstream 0.5kb downstream 500 false Chr13: 39762980-39763479 Glycine max
Glyma.13G299300 1.0kb upstream 1.0kb upstream 5709 true Chr13: 39757271-39762979 Glycine max
Glyma.13G299300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39757271-39758270 Glycine max
Glyma.13G299300 1.0kb downstream 1.0kb downstream 5709 true Chr13: 39758271-39763979 Glycine max
Glyma.13G299300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39762980-39763979 Glycine max
Glyma.13G299300 2.0kb upstream 2.0kb upstream 6709 true Chr13: 39756271-39762979 Glycine max
Glyma.13G299300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39756271-39758270 Glycine max
Glyma.13G299300 2.0kb downstream 2.0kb downstream 6709 true Chr13: 39758271-39764979 Glycine max
Glyma.13G299300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39762980-39764979 Glycine max
Glyma.13G299300 5.0kb upstream 5.0kb upstream 9709 true Chr13: 39753271-39762979 Glycine max
Glyma.13G299300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39753271-39758270 Glycine max
Glyma.13G299300 5.0kb downstream 5.0kb downstream 9709 true Chr13: 39758271-39767979 Glycine max
Glyma.13G299300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39762980-39767979 Glycine max
Glyma.13G299300 10.0kb upstream 10.0kb upstream 14709 true Chr13: 39748271-39762979 Glycine max
Glyma.13G299300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39748271-39758270 Glycine max
Glyma.13G299300 10.0kb downstream 10.0kb downstream 14709 true Chr13: 39758271-39772979 Glycine max
Glyma.13G299300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39762980-39772979 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617645 5273 Angiosperm View MSA
122253758 5265 Fabidae View MSA
123996222 5270 Rosid View MSA
123570737 5271 Pentapetalae View MSA
122605472 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.14981 0.0 21.5567   Low
cufflinks 17.3661 0.0 74.4172    
cufflinks 20.7444 0.0 92.09 High High
cufflinks 8.63009 0.0 37.6849    
cufflinks 6.32508 0.0 31.5142    
cufflinks 8.98832 0.0 36.8984    
cufflinks 33.5783 0.0 150.633 High High
cufflinks 8.1826 0.0 36.3811    
cufflinks 7.96101 0.0 32.8446    
cufflinks 0.603        
cufflinks 0.527        
cufflinks 1.164        
cufflinks 0.471        
cufflinks 0.338       Low
cufflinks 0.187       Low
cufflinks 0.888        
cufflinks 0.516        
cufflinks 1.324       High
cufflinks 1.982       High
cufflinks 0.75        
cufflinks 0.635        
cufflinks 0.879        
cufflinks 0.94        
cufflinks 0.838        
cufflinks 0.81        
cufflinks 0.486        

0 Strain