Gene : Glyma.13G278900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR21860:SF2 - GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 6 Genomic Order:  2789
Name:  ? Glyma.13G278900 Secondary Identifier:  ? PAC:30503039
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G278900 0.5kb upstream 0.5kb upstream 4069 true Chr13: 37997496-38001564 Glycine max
Glyma.13G278900 0.5kb upstream 0.5kb upstream 500 false Chr13: 37997496-37997995 Glycine max
Glyma.13G278900 0.5kb downstream 0.5kb downstream 4069 true Chr13: 37997996-38002064 Glycine max
Glyma.13G278900 0.5kb downstream 0.5kb downstream 500 false Chr13: 38001565-38002064 Glycine max
Glyma.13G278900 1.0kb upstream 1.0kb upstream 4569 true Chr13: 37996996-38001564 Glycine max
Glyma.13G278900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37996996-37997995 Glycine max
Glyma.13G278900 1.0kb downstream 1.0kb downstream 4569 true Chr13: 37997996-38002564 Glycine max
Glyma.13G278900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38001565-38002564 Glycine max
Glyma.13G278900 2.0kb upstream 2.0kb upstream 5569 true Chr13: 37995996-38001564 Glycine max
Glyma.13G278900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37995996-37997995 Glycine max
Glyma.13G278900 2.0kb downstream 2.0kb downstream 5569 true Chr13: 37997996-38003564 Glycine max
Glyma.13G278900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38001565-38003564 Glycine max
Glyma.13G278900 5.0kb upstream 5.0kb upstream 8569 true Chr13: 37992996-38001564 Glycine max
Glyma.13G278900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37992996-37997995 Glycine max
Glyma.13G278900 5.0kb downstream 5.0kb downstream 8569 true Chr13: 37997996-38006564 Glycine max
Glyma.13G278900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38001565-38006564 Glycine max
Glyma.13G278900 10.0kb upstream 10.0kb upstream 13569 true Chr13: 37987996-38001564 Glycine max
Glyma.13G278900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37987996-37997995 Glycine max
Glyma.13G278900 10.0kb downstream 10.0kb downstream 13569 true Chr13: 37997996-38011564 Glycine max
Glyma.13G278900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38001565-38011564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308962 5265 Fabidae View MSA
124063555 5270 Rosid View MSA
123752386 5271 Pentapetalae View MSA
122794518 5272 Eudicot View MSA
122047017 5273 Angiosperm View MSA
121348474 5274 Embryophyte View MSA
123425991 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.19275 0.0 27.0838    
cufflinks 4.78029 0.0 26.7118    
cufflinks 4.01635 0.0 20.6238   Low
cufflinks 6.2867 0.0 27.9854   High
cufflinks 4.91923 0.0 23.288    
cufflinks 4.02093 0.0 26.9044   Low
cufflinks 5.32359 0.0 25.2054    
cufflinks 5.90967 0.0 29.3655   High
cufflinks 4.10217 0.0 23.4526   Low
cufflinks 0.482        
cufflinks 0.673        
cufflinks 0.352       Low
cufflinks 0.561        
cufflinks 0.732        
cufflinks 0.798       High
cufflinks 0.708        
cufflinks 0.312       Low
cufflinks 0.673        
cufflinks 0.589        
cufflinks 0.689        
cufflinks 0.806       High
cufflinks 0.699        
cufflinks 0.646        
cufflinks 0.603        
cufflinks 0.664        
cufflinks 0.537        

0 Strain