Gene : Glyma.13G278800 G. max Wm82.a2.v1
Defline:  (1 of 62) PF00560//PF13855 - Leucine Rich Repeat (LRR_1) // Leucine rich repeat (LRR_8) Genomic Order:  2788
Name:  ? Glyma.13G278800 Secondary Identifier:  ? PAC:30505682
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G278800 0.5kb upstream 0.5kb upstream 8345 true Chr13: 37989024-37997368 Glycine max
Glyma.13G278800 0.5kb upstream 0.5kb upstream 500 false Chr13: 37989024-37989523 Glycine max
Glyma.13G278800 0.5kb downstream 0.5kb downstream 8345 true Chr13: 37989524-37997868 Glycine max
Glyma.13G278800 0.5kb downstream 0.5kb downstream 500 false Chr13: 37997369-37997868 Glycine max
Glyma.13G278800 1.0kb upstream 1.0kb upstream 8845 true Chr13: 37988524-37997368 Glycine max
Glyma.13G278800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37988524-37989523 Glycine max
Glyma.13G278800 1.0kb downstream 1.0kb downstream 8845 true Chr13: 37989524-37998368 Glycine max
Glyma.13G278800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37997369-37998368 Glycine max
Glyma.13G278800 2.0kb upstream 2.0kb upstream 9845 true Chr13: 37987524-37997368 Glycine max
Glyma.13G278800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37987524-37989523 Glycine max
Glyma.13G278800 2.0kb downstream 2.0kb downstream 9845 true Chr13: 37989524-37999368 Glycine max
Glyma.13G278800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37997369-37999368 Glycine max
Glyma.13G278800 5.0kb upstream 5.0kb upstream 12845 true Chr13: 37984524-37997368 Glycine max
Glyma.13G278800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37984524-37989523 Glycine max
Glyma.13G278800 5.0kb downstream 5.0kb downstream 12845 true Chr13: 37989524-38002368 Glycine max
Glyma.13G278800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37997369-38002368 Glycine max
Glyma.13G278800 10.0kb upstream 10.0kb upstream 17845 true Chr13: 37979524-37997368 Glycine max
Glyma.13G278800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37979524-37989523 Glycine max
Glyma.13G278800 10.0kb downstream 10.0kb downstream 17845 true Chr13: 37989524-38007368 Glycine max
Glyma.13G278800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37997369-38007368 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307241 5265 Fabidae View MSA
124061452 5270 Rosid View MSA
123738353 5271 Pentapetalae View MSA
122792030 5272 Eudicot View MSA
122042195 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121345842 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.7654 0.0 18.6682    
cufflinks 6.73228 0.0 21.1222    
cufflinks 8.51649 0.0 25.8989   High
cufflinks 5.77414 0.0 18.5825    
cufflinks 8.14716 0.0 24.9476    
cufflinks 4.82933 0.0 19.0981   Low
cufflinks 8.29712 0.0 25.4235   High
cufflinks 7.36697 0.0 26.9645    
cufflinks 6.79896 0.0 21.3531    
cufflinks 1.081        
cufflinks 0.386       Low
cufflinks 1.339        
cufflinks 1.291        
cufflinks 1.535       High
cufflinks 0.687        
cufflinks 1.11        
cufflinks 0.611       Low
cufflinks 1.753       High
cufflinks 1.389        
cufflinks 1.111        
cufflinks 0.653        
cufflinks 1.164        
cufflinks 1.208        
cufflinks 0.605       Low
cufflinks 1.111        
cufflinks 0.647        

0 Strain