Gene : Glyma.13G233800 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2338
Name:  ? Glyma.13G233800 Secondary Identifier:  ? PAC:30501746
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G233800 0.5kb upstream 0.5kb upstream 1634 true Chr13: 34455247-34456880 Glycine max
Glyma.13G233800 0.5kb upstream 0.5kb upstream 500 false Chr13: 34455247-34455746 Glycine max
Glyma.13G233800 0.5kb downstream 0.5kb downstream 1634 true Chr13: 34455747-34457380 Glycine max
Glyma.13G233800 0.5kb downstream 0.5kb downstream 500 false Chr13: 34456881-34457380 Glycine max
Glyma.13G233800 1.0kb upstream 1.0kb upstream 2134 true Chr13: 34454747-34456880 Glycine max
Glyma.13G233800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34454747-34455746 Glycine max
Glyma.13G233800 1.0kb downstream 1.0kb downstream 2134 true Chr13: 34455747-34457880 Glycine max
Glyma.13G233800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34456881-34457880 Glycine max
Glyma.13G233800 2.0kb upstream 2.0kb upstream 3134 true Chr13: 34453747-34456880 Glycine max
Glyma.13G233800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34453747-34455746 Glycine max
Glyma.13G233800 2.0kb downstream 2.0kb downstream 3134 true Chr13: 34455747-34458880 Glycine max
Glyma.13G233800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34456881-34458880 Glycine max
Glyma.13G233800 5.0kb upstream 5.0kb upstream 6134 true Chr13: 34450747-34456880 Glycine max
Glyma.13G233800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34450747-34455746 Glycine max
Glyma.13G233800 5.0kb downstream 5.0kb downstream 6134 true Chr13: 34455747-34461880 Glycine max
Glyma.13G233800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34456881-34461880 Glycine max
Glyma.13G233800 10.0kb upstream 10.0kb upstream 11134 true Chr13: 34445747-34456880 Glycine max
Glyma.13G233800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34445747-34455746 Glycine max
Glyma.13G233800 10.0kb downstream 10.0kb downstream 11134 true Chr13: 34455747-34466880 Glycine max
Glyma.13G233800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34456881-34466880 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300646 5265 Fabidae View MSA
124074692 5270 Rosid View MSA
123751069 5271 Pentapetalae View MSA
122793913 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.344733 0.0 1.31943    
cufflinks 0.0102757 0.0 0.0494057 Low Low
cufflinks 0.85193 0.0 3.13952    
cufflinks 5.07538 0.0 15.6427   High
cufflinks 0.0170531 0.0 0.0781069 Low Low
cufflinks 0.0380218 0.0 0.162132 Low  
cufflinks 0.377825 0.0 1.44492    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.969        
cufflinks 0.386        
cufflinks 2.238       High
cufflinks 4.224       High
cufflinks 0.201       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.679        
cufflinks 0.081     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.907        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.501        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.074        

0 Strain