Gene : Glyma.13G156400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11630:SF42 - DNA REPLICATION LICENSING FACTOR MCM5 Genomic Order:  1564
Name:  ? Glyma.13G156400 Secondary Identifier:  ? PAC:30506058
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G156400 0.5kb upstream 0.5kb upstream 6291 true Chr13: 27127850-27134140 Glycine max
Glyma.13G156400 0.5kb upstream 0.5kb upstream 500 false Chr13: 27133641-27134140 Glycine max
Glyma.13G156400 0.5kb downstream 0.5kb downstream 6291 true Chr13: 27127350-27133640 Glycine max
Glyma.13G156400 0.5kb downstream 0.5kb downstream 500 false Chr13: 27127350-27127849 Glycine max
Glyma.13G156400 1.0kb upstream 1.0kb upstream 6791 true Chr13: 27127850-27134640 Glycine max
Glyma.13G156400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27133641-27134640 Glycine max
Glyma.13G156400 1.0kb downstream 1.0kb downstream 6791 true Chr13: 27126850-27133640 Glycine max
Glyma.13G156400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27126850-27127849 Glycine max
Glyma.13G156400 2.0kb upstream 2.0kb upstream 7791 true Chr13: 27127850-27135640 Glycine max
Glyma.13G156400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27133641-27135640 Glycine max
Glyma.13G156400 2.0kb downstream 2.0kb downstream 7791 true Chr13: 27125850-27133640 Glycine max
Glyma.13G156400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27125850-27127849 Glycine max
Glyma.13G156400 5.0kb upstream 5.0kb upstream 10791 true Chr13: 27127850-27138640 Glycine max
Glyma.13G156400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27133641-27138640 Glycine max
Glyma.13G156400 5.0kb downstream 5.0kb downstream 10791 true Chr13: 27122850-27133640 Glycine max
Glyma.13G156400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27122850-27127849 Glycine max
Glyma.13G156400 10.0kb upstream 10.0kb upstream 15791 true Chr13: 27127850-27143640 Glycine max
Glyma.13G156400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27133641-27143640 Glycine max
Glyma.13G156400 10.0kb downstream 10.0kb downstream 15791 true Chr13: 27117850-27133640 Glycine max
Glyma.13G156400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27117850-27127849 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304817 5265 Fabidae View MSA
124068340 5270 Rosid View MSA
123739009 5271 Pentapetalae View MSA
122789464 5272 Eudicot View MSA
122046085 5273 Angiosperm View MSA
123428876 5275 Viridiplantae View MSA
121346646 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.691336 0.0 2.41239   Low
cufflinks 13.1815 0.0 35.2524   High
cufflinks 1.45343 0.0 4.63065    
cufflinks 3.62353 0.0 10.2349    
cufflinks 5.04063 0.0 13.8274    
cufflinks 2.55444 0.0 7.53638    
cufflinks 3.06197 0.0 8.84904    
cufflinks 3.94755 0.0 11.0456    
cufflinks 5.41939 0.0 14.7852    
cufflinks 2.584        
cufflinks 0.261       Low
cufflinks 2.603        
cufflinks 4.262        
cufflinks 4.984        
cufflinks 0.316       Low
cufflinks 4.228        
cufflinks 0.873        
cufflinks 2.082        
cufflinks 10.264     High High
cufflinks 2.882        
cufflinks 0.412       Low
cufflinks 3.817        
cufflinks 8.291     High High
cufflinks 0.428       Low
cufflinks 3.198        
cufflinks 0.897        

0 Strain