Gene : Glyma.13G163900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12294//PTHR12294:SF12 - EF HAND DOMAIN FAMILY A1,A2-RELATED Genomic Order:  1639
Name:  ? Glyma.13G163900 Secondary Identifier:  ? PAC:30505561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G163900 0.5kb upstream 0.5kb upstream 4152 true Chr13: 27905208-27909359 Glycine max
Glyma.13G163900 0.5kb upstream 0.5kb upstream 500 false Chr13: 27908860-27909359 Glycine max
Glyma.13G163900 0.5kb downstream 0.5kb downstream 4152 true Chr13: 27904708-27908859 Glycine max
Glyma.13G163900 0.5kb downstream 0.5kb downstream 500 false Chr13: 27904708-27905207 Glycine max
Glyma.13G163900 1.0kb upstream 1.0kb upstream 4652 true Chr13: 27905208-27909859 Glycine max
Glyma.13G163900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27908860-27909859 Glycine max
Glyma.13G163900 1.0kb downstream 1.0kb downstream 4652 true Chr13: 27904208-27908859 Glycine max
Glyma.13G163900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27904208-27905207 Glycine max
Glyma.13G163900 2.0kb upstream 2.0kb upstream 5652 true Chr13: 27905208-27910859 Glycine max
Glyma.13G163900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27908860-27910859 Glycine max
Glyma.13G163900 2.0kb downstream 2.0kb downstream 5652 true Chr13: 27903208-27908859 Glycine max
Glyma.13G163900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27903208-27905207 Glycine max
Glyma.13G163900 5.0kb upstream 5.0kb upstream 8652 true Chr13: 27905208-27913859 Glycine max
Glyma.13G163900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27908860-27913859 Glycine max
Glyma.13G163900 5.0kb downstream 5.0kb downstream 8652 true Chr13: 27900208-27908859 Glycine max
Glyma.13G163900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27900208-27905207 Glycine max
Glyma.13G163900 10.0kb upstream 10.0kb upstream 13652 true Chr13: 27905208-27918859 Glycine max
Glyma.13G163900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27908860-27918859 Glycine max
Glyma.13G163900 10.0kb downstream 10.0kb downstream 13652 true Chr13: 27895208-27908859 Glycine max
Glyma.13G163900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27895208-27905207 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302172 5265 Fabidae View MSA
124073183 5270 Rosid View MSA
123742641 5271 Pentapetalae View MSA
122790177 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.12404 0.0 24.5018   High
cufflinks 0.0966878 0.0 0.384599 Low  
cufflinks 0.986752 0.0 4.28905   High
cufflinks 0.0493051 0.0 0.204621 Low  
cufflinks 0.0226676 0.0 0.105497 Low  
cufflinks 0.268664 0.0 1.28475 Low  
cufflinks 0.0338351 0.0 0.14193 Low  
cufflinks 0.0255789 0.0 0.112515 Low  
cufflinks 0.0622575 0.0 0.252206 Low  
cufflinks 0.004     Low Low
cufflinks 0.047     Low  
cufflinks 0.135        
cufflinks 0.04     Low  
cufflinks 0.019     Low  
cufflinks 0.016     Low  
cufflinks 0.79       High
cufflinks 0.017     Low  
cufflinks 1.564       High
cufflinks 0.046     Low  
cufflinks 0.478        
cufflinks 0.02     Low  
cufflinks 0.705       High
cufflinks 0.595       High
cufflinks 0.038     Low  
cufflinks 0.898       High
cufflinks 0.018     Low  

0 Strain