Gene : Glyma.13G169200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11373 - SAM DOMAIN AND HD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1692
Name:  ? Glyma.13G169200 Secondary Identifier:  ? PAC:30502139
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G169200 0.5kb upstream 0.5kb upstream 8303 true Chr13: 28329738-28338040 Glycine max
Glyma.13G169200 0.5kb upstream 0.5kb upstream 500 false Chr13: 28329738-28330237 Glycine max
Glyma.13G169200 0.5kb downstream 0.5kb downstream 8303 true Chr13: 28330238-28338540 Glycine max
Glyma.13G169200 0.5kb downstream 0.5kb downstream 500 false Chr13: 28338041-28338540 Glycine max
Glyma.13G169200 1.0kb upstream 1.0kb upstream 8803 true Chr13: 28329238-28338040 Glycine max
Glyma.13G169200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28329238-28330237 Glycine max
Glyma.13G169200 1.0kb downstream 1.0kb downstream 8803 true Chr13: 28330238-28339040 Glycine max
Glyma.13G169200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28338041-28339040 Glycine max
Glyma.13G169200 2.0kb upstream 2.0kb upstream 9803 true Chr13: 28328238-28338040 Glycine max
Glyma.13G169200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28328238-28330237 Glycine max
Glyma.13G169200 2.0kb downstream 2.0kb downstream 9803 true Chr13: 28330238-28340040 Glycine max
Glyma.13G169200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28338041-28340040 Glycine max
Glyma.13G169200 5.0kb upstream 5.0kb upstream 12803 true Chr13: 28325238-28338040 Glycine max
Glyma.13G169200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28325238-28330237 Glycine max
Glyma.13G169200 5.0kb downstream 5.0kb downstream 12803 true Chr13: 28330238-28343040 Glycine max
Glyma.13G169200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28338041-28343040 Glycine max
Glyma.13G169200 10.0kb upstream 10.0kb upstream 17803 true Chr13: 28320238-28338040 Glycine max
Glyma.13G169200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28320238-28330237 Glycine max
Glyma.13G169200 10.0kb downstream 10.0kb downstream 17803 true Chr13: 28330238-28348040 Glycine max
Glyma.13G169200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28338041-28348040 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299686 5265 Fabidae View MSA
124060533 5270 Rosid View MSA
123738198 5271 Pentapetalae View MSA
122788126 5272 Eudicot View MSA
122047441 5273 Angiosperm View MSA
121347014 5274 Embryophyte View MSA
123426203 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.87522 0.0 21.6856    
cufflinks 3.46672 0.0 17.5362    
cufflinks 28.2492 0.0 139.872 High High
cufflinks 4.97369 0.0 24.6617    
cufflinks 3.92178 0.0 22.5112    
cufflinks 27.9011 0.0 124.429 High High
cufflinks 2.69882 0.0 16.5501   Low
cufflinks 6.7624 0.0 36.3879    
cufflinks 5.14839 0.0 29.4492    
cufflinks 0.183        
cufflinks 0.097        
cufflinks 0.631       High
cufflinks 0.209        
cufflinks 0.132        
cufflinks 0.04     Low Low
cufflinks 0.138        
cufflinks 0.138        
cufflinks 0.223        
cufflinks 0.148        
cufflinks 0.136        
cufflinks 0.1        
cufflinks 0.146        
cufflinks 0.163        
cufflinks 0.095        
cufflinks 0.155        
cufflinks 0.123        

0 Strain