Gene : Glyma.13G122800 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1228
Name:  ? Glyma.13G122800 Secondary Identifier:  ? PAC:30501063
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G122800 0.5kb upstream 0.5kb upstream 1106 true Chr13: 23570634-23571739 Glycine max
Glyma.13G122800 0.5kb upstream 0.5kb upstream 500 false Chr13: 23570634-23571133 Glycine max
Glyma.13G122800 0.5kb downstream 0.5kb downstream 1106 true Chr13: 23571134-23572239 Glycine max
Glyma.13G122800 0.5kb downstream 0.5kb downstream 500 false Chr13: 23571740-23572239 Glycine max
Glyma.13G122800 1.0kb upstream 1.0kb upstream 1606 true Chr13: 23570134-23571739 Glycine max
Glyma.13G122800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23570134-23571133 Glycine max
Glyma.13G122800 1.0kb downstream 1.0kb downstream 1606 true Chr13: 23571134-23572739 Glycine max
Glyma.13G122800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23571740-23572739 Glycine max
Glyma.13G122800 2.0kb upstream 2.0kb upstream 2606 true Chr13: 23569134-23571739 Glycine max
Glyma.13G122800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23569134-23571133 Glycine max
Glyma.13G122800 2.0kb downstream 2.0kb downstream 2606 true Chr13: 23571134-23573739 Glycine max
Glyma.13G122800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23571740-23573739 Glycine max
Glyma.13G122800 5.0kb upstream 5.0kb upstream 5606 true Chr13: 23566134-23571739 Glycine max
Glyma.13G122800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23566134-23571133 Glycine max
Glyma.13G122800 5.0kb downstream 5.0kb downstream 5606 true Chr13: 23571134-23576739 Glycine max
Glyma.13G122800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23571740-23576739 Glycine max
Glyma.13G122800 10.0kb upstream 10.0kb upstream 10606 true Chr13: 23561134-23571739 Glycine max
Glyma.13G122800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23561134-23571133 Glycine max
Glyma.13G122800 10.0kb downstream 10.0kb downstream 10606 true Chr13: 23571134-23581739 Glycine max
Glyma.13G122800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23571740-23581739 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254093 5265 Fabidae View MSA
123996412 5270 Rosid View MSA
123570888 5271 Pentapetalae View MSA
122605621 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.6242 0.0 103.933 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0210867 0.0 0.101386 Low  
cufflinks 0.0640419 0.0 0.276528 Low  
cufflinks 0.221106 0.0 0.887618 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0766485 0.0 0.326665 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.345        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.082     Low Low
cufflinks 0.13        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.223        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.196        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.058       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.957       High

0 Strain