Gene : Glyma.13G122700 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1227
Name:  ? Glyma.13G122700 Secondary Identifier:  ? PAC:30504027
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G122700 0.5kb upstream 0.5kb upstream 1163 true Chr13: 23556535-23557697 Glycine max
Glyma.13G122700 0.5kb upstream 0.5kb upstream 500 false Chr13: 23556535-23557034 Glycine max
Glyma.13G122700 0.5kb downstream 0.5kb downstream 1163 true Chr13: 23557035-23558197 Glycine max
Glyma.13G122700 0.5kb downstream 0.5kb downstream 500 false Chr13: 23557698-23558197 Glycine max
Glyma.13G122700 1.0kb upstream 1.0kb upstream 1663 true Chr13: 23556035-23557697 Glycine max
Glyma.13G122700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23556035-23557034 Glycine max
Glyma.13G122700 1.0kb downstream 1.0kb downstream 1663 true Chr13: 23557035-23558697 Glycine max
Glyma.13G122700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23557698-23558697 Glycine max
Glyma.13G122700 2.0kb upstream 2.0kb upstream 2663 true Chr13: 23555035-23557697 Glycine max
Glyma.13G122700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23555035-23557034 Glycine max
Glyma.13G122700 2.0kb downstream 2.0kb downstream 2663 true Chr13: 23557035-23559697 Glycine max
Glyma.13G122700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23557698-23559697 Glycine max
Glyma.13G122700 5.0kb upstream 5.0kb upstream 5663 true Chr13: 23552035-23557697 Glycine max
Glyma.13G122700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23552035-23557034 Glycine max
Glyma.13G122700 5.0kb downstream 5.0kb downstream 5663 true Chr13: 23557035-23562697 Glycine max
Glyma.13G122700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23557698-23562697 Glycine max
Glyma.13G122700 10.0kb upstream 10.0kb upstream 10663 true Chr13: 23547035-23557697 Glycine max
Glyma.13G122700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23547035-23557034 Glycine max
Glyma.13G122700 10.0kb downstream 10.0kb downstream 10663 true Chr13: 23557035-23567697 Glycine max
Glyma.13G122700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23557698-23567697 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297843 5265 Fabidae View MSA
124040463 5270 Rosid View MSA
123747853 5271 Pentapetalae View MSA
122772336 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0323318 0.0 0.146221 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0268058 0.0 0.123151 Low  
cufflinks 0.121175 0.0 0.495426 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.344391 0.0 1.34878   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low Low
cufflinks 0.102        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.121        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.155       High

0 Strain