Gene : Glyma.13G117000 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR21562:SF5 - PECTINACETYLESTERASE FAMILY PROTEIN Genomic Order:  1170
Name:  ? Glyma.13G117000 Secondary Identifier:  ? PAC:30503141
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G117000 0.5kb upstream 0.5kb upstream 8728 true Chr13: 23018795-23027522 Glycine max
Glyma.13G117000 0.5kb upstream 0.5kb upstream 500 false Chr13: 23018795-23019294 Glycine max
Glyma.13G117000 0.5kb downstream 0.5kb downstream 8728 true Chr13: 23019295-23028022 Glycine max
Glyma.13G117000 0.5kb downstream 0.5kb downstream 500 false Chr13: 23027523-23028022 Glycine max
Glyma.13G117000 1.0kb upstream 1.0kb upstream 9228 true Chr13: 23018295-23027522 Glycine max
Glyma.13G117000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23018295-23019294 Glycine max
Glyma.13G117000 1.0kb downstream 1.0kb downstream 9228 true Chr13: 23019295-23028522 Glycine max
Glyma.13G117000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23027523-23028522 Glycine max
Glyma.13G117000 2.0kb upstream 2.0kb upstream 10228 true Chr13: 23017295-23027522 Glycine max
Glyma.13G117000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23017295-23019294 Glycine max
Glyma.13G117000 2.0kb downstream 2.0kb downstream 10228 true Chr13: 23019295-23029522 Glycine max
Glyma.13G117000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23027523-23029522 Glycine max
Glyma.13G117000 5.0kb upstream 5.0kb upstream 13228 true Chr13: 23014295-23027522 Glycine max
Glyma.13G117000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23014295-23019294 Glycine max
Glyma.13G117000 5.0kb downstream 5.0kb downstream 13228 true Chr13: 23019295-23032522 Glycine max
Glyma.13G117000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23027523-23032522 Glycine max
Glyma.13G117000 10.0kb upstream 10.0kb upstream 18228 true Chr13: 23009295-23027522 Glycine max
Glyma.13G117000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23009295-23019294 Glycine max
Glyma.13G117000 10.0kb downstream 10.0kb downstream 18228 true Chr13: 23019295-23037522 Glycine max
Glyma.13G117000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23027523-23037522 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300555 5265 Fabidae View MSA
124071673 5270 Rosid View MSA
123743423 5271 Pentapetalae View MSA
122794990 5272 Eudicot View MSA
122043420 5273 Angiosperm View MSA
121351620 5274 Embryophyte View MSA
123428380 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01047 0.0 7.3424   Low
cufflinks 3.76317 0.0 21.1844    
cufflinks 1.61866 0.0 9.79915   Low
cufflinks 9.94362 0.0 46.682    
cufflinks 8.2855 0.0 37.3848    
cufflinks 3.45185 0.0 22.8989    
cufflinks 5.56723 0.0 27.2241    
cufflinks 20.1366 0.0 86.3602   High
cufflinks 4.50429 0.0 23.2239    
cufflinks 1.501       High
cufflinks 0.014     Low Low
cufflinks 0.182        
cufflinks 0.34        
cufflinks 0.687        
cufflinks 0.015     Low Low
cufflinks 0.653        
cufflinks 0.122        
cufflinks 0.627        
cufflinks 0.153        
cufflinks 0.654        
cufflinks 0.042     Low  
cufflinks 0.508        
cufflinks 0.709        
cufflinks 0.003     Low Low
cufflinks 0.504        
cufflinks 0.084        

0 Strain