Gene : Glyma.13G116800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23071 - PHOSPHATIDYLINOSITOL GLYCAN Genomic Order:  1168
Name:  ? Glyma.13G116800 Secondary Identifier:  ? PAC:30504939
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G116800 0.5kb upstream 0.5kb upstream 9838 true Chr13: 23000997-23010834 Glycine max
Glyma.13G116800 0.5kb upstream 0.5kb upstream 500 false Chr13: 23000997-23001496 Glycine max
Glyma.13G116800 0.5kb downstream 0.5kb downstream 9838 true Chr13: 23001497-23011334 Glycine max
Glyma.13G116800 0.5kb downstream 0.5kb downstream 500 false Chr13: 23010835-23011334 Glycine max
Glyma.13G116800 1.0kb upstream 1.0kb upstream 10338 true Chr13: 23000497-23010834 Glycine max
Glyma.13G116800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23000497-23001496 Glycine max
Glyma.13G116800 1.0kb downstream 1.0kb downstream 10338 true Chr13: 23001497-23011834 Glycine max
Glyma.13G116800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23010835-23011834 Glycine max
Glyma.13G116800 2.0kb upstream 2.0kb upstream 11338 true Chr13: 22999497-23010834 Glycine max
Glyma.13G116800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22999497-23001496 Glycine max
Glyma.13G116800 2.0kb downstream 2.0kb downstream 11338 true Chr13: 23001497-23012834 Glycine max
Glyma.13G116800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23010835-23012834 Glycine max
Glyma.13G116800 5.0kb upstream 5.0kb upstream 14338 true Chr13: 22996497-23010834 Glycine max
Glyma.13G116800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22996497-23001496 Glycine max
Glyma.13G116800 5.0kb downstream 5.0kb downstream 14338 true Chr13: 23001497-23015834 Glycine max
Glyma.13G116800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23010835-23015834 Glycine max
Glyma.13G116800 10.0kb upstream 10.0kb upstream 19338 true Chr13: 22991497-23010834 Glycine max
Glyma.13G116800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22991497-23001496 Glycine max
Glyma.13G116800 10.0kb downstream 10.0kb downstream 19338 true Chr13: 23001497-23020834 Glycine max
Glyma.13G116800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23010835-23020834 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302126 5265 Fabidae View MSA
124060946 5270 Rosid View MSA
123738911 5271 Pentapetalae View MSA
122791946 5272 Eudicot View MSA
122044137 5273 Angiosperm View MSA
121345905 5274 Embryophyte View MSA
123425893 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.35767 0.0 19.5803   High
cufflinks 3.36211 0.0 11.6762    
cufflinks 6.02759 0.0 18.5557   High
cufflinks 4.65647 0.0 17.456    
cufflinks 4.28124 0.0 14.0516    
cufflinks 4.06856 0.0 13.4626    
cufflinks 2.67093 0.0 9.95436   Low
cufflinks 4.21231 0.0 16.0648    
cufflinks 3.62859 0.0 12.3954    
cufflinks 0.665        
cufflinks 0.564       Low
cufflinks 0.797        
cufflinks 0.673        
cufflinks 0.894       High
cufflinks 0.576       Low
cufflinks 0.691        
cufflinks 0.556       Low
cufflinks 0.884       High
cufflinks 0.788        
cufflinks 0.73        
cufflinks 0.607        
cufflinks 0.771        
cufflinks 0.733        
cufflinks 0.693        
cufflinks 0.644        
cufflinks 0.606        

0 Strain