Gene : Glyma.13G081400 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN Genomic Order:  814
Name:  ? Glyma.13G081400 Secondary Identifier:  ? PAC:30505404
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G081400 0.5kb upstream 0.5kb upstream 3117 true Chr13: 18999204-19002320 Glycine max
Glyma.13G081400 0.5kb upstream 0.5kb upstream 500 false Chr13: 19001821-19002320 Glycine max
Glyma.13G081400 0.5kb downstream 0.5kb downstream 3117 true Chr13: 18998704-19001820 Glycine max
Glyma.13G081400 0.5kb downstream 0.5kb downstream 500 false Chr13: 18998704-18999203 Glycine max
Glyma.13G081400 1.0kb upstream 1.0kb upstream 3617 true Chr13: 18999204-19002820 Glycine max
Glyma.13G081400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 19001821-19002820 Glycine max
Glyma.13G081400 1.0kb downstream 1.0kb downstream 3617 true Chr13: 18998204-19001820 Glycine max
Glyma.13G081400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 18998204-18999203 Glycine max
Glyma.13G081400 2.0kb upstream 2.0kb upstream 4617 true Chr13: 18999204-19003820 Glycine max
Glyma.13G081400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 19001821-19003820 Glycine max
Glyma.13G081400 2.0kb downstream 2.0kb downstream 4617 true Chr13: 18997204-19001820 Glycine max
Glyma.13G081400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 18997204-18999203 Glycine max
Glyma.13G081400 5.0kb upstream 5.0kb upstream 7617 true Chr13: 18999204-19006820 Glycine max
Glyma.13G081400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 19001821-19006820 Glycine max
Glyma.13G081400 5.0kb downstream 5.0kb downstream 7617 true Chr13: 18994204-19001820 Glycine max
Glyma.13G081400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 18994204-18999203 Glycine max
Glyma.13G081400 10.0kb upstream 10.0kb upstream 12617 true Chr13: 18999204-19011820 Glycine max
Glyma.13G081400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 19001821-19011820 Glycine max
Glyma.13G081400 10.0kb downstream 10.0kb downstream 12617 true Chr13: 18989204-19001820 Glycine max
Glyma.13G081400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 18989204-18999203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254901 5265 Fabidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2096 0.0 33.7476    
cufflinks 10.1025 0.0 28.3923    
cufflinks 4.9307 0.0 15.1151   Low
cufflinks 17.5144 0.0 47.2087    
cufflinks 17.0832 0.0 46.1703    
cufflinks 36.6012 0.0 97.9986 High High
cufflinks 7.37772 0.0 21.537    
cufflinks 9.63593 0.0 27.1853    
cufflinks 13.8613 0.0 37.9019    
cufflinks 5.324        
cufflinks 1.203       Low
cufflinks 5.036        
cufflinks 16.985     High High
cufflinks 17.208     High High
cufflinks 2.577        
cufflinks 2.757        
cufflinks 1.997        
cufflinks 5.41        
cufflinks 8.39     High High
cufflinks 2.287        
cufflinks 1.57       Low
cufflinks 2.856        
cufflinks 5.884        
cufflinks 1.284       Low
cufflinks 2.67        
cufflinks 2.669        

0 Strain