Gene : Glyma.13G052800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10209//PTHR10209:SF124 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN Genomic Order:  528
Name:  ? Glyma.13G052800 Secondary Identifier:  ? PAC:30504359
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G052800 0.5kb upstream 0.5kb upstream 4983 true Chr13: 15004641-15009623 Glycine max
Glyma.13G052800 0.5kb upstream 0.5kb upstream 500 false Chr13: 15004641-15005140 Glycine max
Glyma.13G052800 0.5kb downstream 0.5kb downstream 4983 true Chr13: 15005141-15010123 Glycine max
Glyma.13G052800 0.5kb downstream 0.5kb downstream 500 false Chr13: 15009624-15010123 Glycine max
Glyma.13G052800 1.0kb upstream 1.0kb upstream 5483 true Chr13: 15004141-15009623 Glycine max
Glyma.13G052800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15004141-15005140 Glycine max
Glyma.13G052800 1.0kb downstream 1.0kb downstream 5483 true Chr13: 15005141-15010623 Glycine max
Glyma.13G052800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15009624-15010623 Glycine max
Glyma.13G052800 2.0kb upstream 2.0kb upstream 6483 true Chr13: 15003141-15009623 Glycine max
Glyma.13G052800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15003141-15005140 Glycine max
Glyma.13G052800 2.0kb downstream 2.0kb downstream 6483 true Chr13: 15005141-15011623 Glycine max
Glyma.13G052800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15009624-15011623 Glycine max
Glyma.13G052800 5.0kb upstream 5.0kb upstream 9483 true Chr13: 15000141-15009623 Glycine max
Glyma.13G052800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15000141-15005140 Glycine max
Glyma.13G052800 5.0kb downstream 5.0kb downstream 9483 true Chr13: 15005141-15014623 Glycine max
Glyma.13G052800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15009624-15014623 Glycine max
Glyma.13G052800 10.0kb upstream 10.0kb upstream 14483 true Chr13: 14995141-15009623 Glycine max
Glyma.13G052800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14995141-15005140 Glycine max
Glyma.13G052800 10.0kb downstream 10.0kb downstream 14483 true Chr13: 15005141-15019623 Glycine max
Glyma.13G052800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15009624-15019623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657022 5273 Angiosperm View MSA
122309538 5265 Fabidae View MSA
124038049 5270 Rosid View MSA
123610625 5271 Pentapetalae View MSA
122645226 5272 Eudicot View MSA
120929076 5274 Embryophyte View MSA
122969651 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0206023 0.0 0.0911922 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.8146 0.0 9.21619    
cufflinks 0.988788 0.0 3.57463    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 13.8362 0.0 37.4975    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06        
cufflinks 0.004     Low Low
cufflinks 0.082     Low  
cufflinks 0.011     Low Low
cufflinks 0.36       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.376       High
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.286        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.284        

0 Strain