Gene : Glyma.13G033000 G. max Wm82.a2.v1
Defline:  (1 of 9) PF00069//PF13947 - Protein kinase domain (Pkinase) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  330
Name:  ? Glyma.13G033000 Secondary Identifier:  ? PAC:30503785
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7409 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G033000 0.5kb upstream 0.5kb upstream 5417 true Chr13: 10491353-10496769 Glycine max
Glyma.13G033000 0.5kb upstream 0.5kb upstream 500 false Chr13: 10496270-10496769 Glycine max
Glyma.13G033000 0.5kb downstream 0.5kb downstream 5417 true Chr13: 10490853-10496269 Glycine max
Glyma.13G033000 0.5kb downstream 0.5kb downstream 500 false Chr13: 10490853-10491352 Glycine max
Glyma.13G033000 1.0kb upstream 1.0kb upstream 5917 true Chr13: 10491353-10497269 Glycine max
Glyma.13G033000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 10496270-10497269 Glycine max
Glyma.13G033000 1.0kb downstream 1.0kb downstream 5917 true Chr13: 10490353-10496269 Glycine max
Glyma.13G033000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 10490353-10491352 Glycine max
Glyma.13G033000 2.0kb upstream 2.0kb upstream 6917 true Chr13: 10491353-10498269 Glycine max
Glyma.13G033000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 10496270-10498269 Glycine max
Glyma.13G033000 2.0kb downstream 2.0kb downstream 6917 true Chr13: 10489353-10496269 Glycine max
Glyma.13G033000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 10489353-10491352 Glycine max
Glyma.13G033000 5.0kb upstream 5.0kb upstream 9917 true Chr13: 10491353-10501269 Glycine max
Glyma.13G033000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 10496270-10501269 Glycine max
Glyma.13G033000 5.0kb downstream 5.0kb downstream 9917 true Chr13: 10486353-10496269 Glycine max
Glyma.13G033000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 10486353-10491352 Glycine max
Glyma.13G033000 10.0kb upstream 10.0kb upstream 14917 true Chr13: 10491353-10506269 Glycine max
Glyma.13G033000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 10496270-10506269 Glycine max
Glyma.13G033000 10.0kb downstream 10.0kb downstream 14917 true Chr13: 10481353-10496269 Glycine max
Glyma.13G033000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 10481353-10491352 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7731 0.0 65.4861   High
cufflinks 0.0353191 0.0 0.154276 Low Low
cufflinks 4.16991 0.0 20.9091   High
cufflinks 0.0413043 0.0 0.171518 Low Low
cufflinks 0.28522 0.0 1.99661    
cufflinks 0.497558 0.0 3.08785    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.119553 0.0 0.891479 Low  
cufflinks 0.333579 0.0 1.6328    
cufflinks 0.018     Low  
cufflinks 0.008     Low  
cufflinks 0.399       High
cufflinks 0.004     Low Low
cufflinks 0.001     Low Low
cufflinks 0.094        
cufflinks 0.038     Low  
cufflinks 0.15       High
cufflinks 0.056     Low  
cufflinks 0.012     Low  
cufflinks 0.035     Low  
cufflinks 0.01     Low  
cufflinks 0.122       High
cufflinks 0.025     Low  
cufflinks 0.013     Low  
cufflinks 0.031     Low  
cufflinks 0.046     Low  

0 Strain