Gene : Glyma.13G030400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  304
Name:  ? Glyma.13G030400 Secondary Identifier:  ? PAC:30506112
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2724 Glycine max pathologic  
Gmax PWY-6054 Glycine max pathologic  
Gmax PWY66-21 Glycine max pathologic  
Gmax PWY66-389 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G030400 0.5kb upstream 0.5kb upstream 7178 true Chr13: 10019110-10026287 Glycine max
Glyma.13G030400 0.5kb upstream 0.5kb upstream 500 false Chr13: 10019110-10019609 Glycine max
Glyma.13G030400 0.5kb downstream 0.5kb downstream 7178 true Chr13: 10019610-10026787 Glycine max
Glyma.13G030400 0.5kb downstream 0.5kb downstream 500 false Chr13: 10026288-10026787 Glycine max
Glyma.13G030400 1.0kb upstream 1.0kb upstream 7678 true Chr13: 10018610-10026287 Glycine max
Glyma.13G030400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 10018610-10019609 Glycine max
Glyma.13G030400 1.0kb downstream 1.0kb downstream 7678 true Chr13: 10019610-10027287 Glycine max
Glyma.13G030400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 10026288-10027287 Glycine max
Glyma.13G030400 2.0kb upstream 2.0kb upstream 8678 true Chr13: 10017610-10026287 Glycine max
Glyma.13G030400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 10017610-10019609 Glycine max
Glyma.13G030400 2.0kb downstream 2.0kb downstream 8678 true Chr13: 10019610-10028287 Glycine max
Glyma.13G030400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 10026288-10028287 Glycine max
Glyma.13G030400 5.0kb upstream 5.0kb upstream 11678 true Chr13: 10014610-10026287 Glycine max
Glyma.13G030400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 10014610-10019609 Glycine max
Glyma.13G030400 5.0kb downstream 5.0kb downstream 11678 true Chr13: 10019610-10031287 Glycine max
Glyma.13G030400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 10026288-10031287 Glycine max
Glyma.13G030400 10.0kb upstream 10.0kb upstream 16678 true Chr13: 10009610-10026287 Glycine max
Glyma.13G030400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 10009610-10019609 Glycine max
Glyma.13G030400 10.0kb downstream 10.0kb downstream 16678 true Chr13: 10019610-10036287 Glycine max
Glyma.13G030400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 10026288-10036287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302333 5265 Fabidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.02554 0.0 25.841    
cufflinks 6.26921 0.0 21.2621    
cufflinks 9.15001 0.0 33.6169   High
cufflinks 6.54488 0.0 21.9476    
cufflinks 5.12307 0.0 18.2671    
cufflinks 4.00819 0.0 15.4296   Low
cufflinks 6.48299 0.0 21.9271    
cufflinks 9.66339 0.0 36.0589   High
cufflinks 7.62719 0.0 24.8321    
cufflinks 1.169        
cufflinks 0.968        
cufflinks 2.686       High
cufflinks 1.007        
cufflinks 1.023        
cufflinks 0.931        
cufflinks 1.142        
cufflinks 1.351        
cufflinks 1.383        
cufflinks 0.965        
cufflinks 1.342        
cufflinks 1.073        
cufflinks 1.207        
cufflinks 1.216        
cufflinks 0.952        
cufflinks 1.252        
cufflinks 1.222        

0 Strain