Gene : Glyma.13G042800 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4581 - Predicted membrane protein Genomic Order:  428
Name:  ? Glyma.13G042800 Secondary Identifier:  ? PAC:30503308
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G042800 0.5kb upstream 0.5kb upstream 4930 true Chr13: 13594389-13599318 Glycine max
Glyma.13G042800 0.5kb upstream 0.5kb upstream 500 false Chr13: 13598819-13599318 Glycine max
Glyma.13G042800 0.5kb downstream 0.5kb downstream 4930 true Chr13: 13593889-13598818 Glycine max
Glyma.13G042800 0.5kb downstream 0.5kb downstream 500 false Chr13: 13593889-13594388 Glycine max
Glyma.13G042800 1.0kb upstream 1.0kb upstream 5430 true Chr13: 13594389-13599818 Glycine max
Glyma.13G042800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 13598819-13599818 Glycine max
Glyma.13G042800 1.0kb downstream 1.0kb downstream 5430 true Chr13: 13593389-13598818 Glycine max
Glyma.13G042800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 13593389-13594388 Glycine max
Glyma.13G042800 2.0kb upstream 2.0kb upstream 6430 true Chr13: 13594389-13600818 Glycine max
Glyma.13G042800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 13598819-13600818 Glycine max
Glyma.13G042800 2.0kb downstream 2.0kb downstream 6430 true Chr13: 13592389-13598818 Glycine max
Glyma.13G042800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 13592389-13594388 Glycine max
Glyma.13G042800 5.0kb upstream 5.0kb upstream 9430 true Chr13: 13594389-13603818 Glycine max
Glyma.13G042800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 13598819-13603818 Glycine max
Glyma.13G042800 5.0kb downstream 5.0kb downstream 9430 true Chr13: 13589389-13598818 Glycine max
Glyma.13G042800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 13589389-13594388 Glycine max
Glyma.13G042800 10.0kb upstream 10.0kb upstream 14430 true Chr13: 13594389-13608818 Glycine max
Glyma.13G042800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 13598819-13608818 Glycine max
Glyma.13G042800 10.0kb downstream 10.0kb downstream 14430 true Chr13: 13584389-13598818 Glycine max
Glyma.13G042800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 13584389-13594388 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303675 5265 Fabidae View MSA
124069094 5270 Rosid View MSA
123746883 5271 Pentapetalae View MSA
122792815 5272 Eudicot View MSA
122047568 5273 Angiosperm View MSA
121344733 5274 Embryophyte View MSA
123423871 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.574 0.0 37.6035    
cufflinks 19.7784 0.0 78.9773   High
cufflinks 6.76026 0.0 30.1378    
cufflinks 1.69607 0.0 6.23022    
cufflinks 2.49503 0.0 11.2184    
cufflinks 2.16985 0.0 7.56652    
cufflinks 3.35087 0.0 13.7145    
cufflinks 7.61495 0.0 28.9256    
cufflinks 0.58185 0.0 2.67035   Low
cufflinks 2.772        
cufflinks 0.003     Low Low
cufflinks 1.551        
cufflinks 0.008     Low  
cufflinks 0.002     Low Low
cufflinks 0.005     Low  
cufflinks 5.431        
cufflinks 0.004     Low Low
cufflinks 0.966        
cufflinks 3.903        
cufflinks 6.665        
cufflinks 0.001     Low Low
cufflinks 6.406        
cufflinks 5.968        
cufflinks 0.003     Low Low
cufflinks 6.94     High High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain