Gene : Glyma.13G010100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24096:SF219 - LONG CHAIN ACYL-COA SYNTHETASE 8 Genomic Order:  101
Name:  ? Glyma.13G010100 Secondary Identifier:  ? PAC:30502134
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY-321 Glycine max pathologic  
Gmax PWY-5136 Glycine max pathologic  
Gmax PWY-5143 Glycine max pathologic  
Gmax PWY-5147 Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5885 Glycine max pathologic  
Gmax PWY-5971 Glycine max pathologic  
Gmax PWY-5989 Glycine max pathologic  
Gmax PWY66-389 Glycine max pathologic  
Gmax PWY-6733 Glycine max pathologic  
Gmax PWY-6803 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G010100 0.5kb upstream 0.5kb upstream 11053 true Chr13: 2735052-2746104 Glycine max
Glyma.13G010100 0.5kb upstream 0.5kb upstream 500 false Chr13: 2735052-2735551 Glycine max
Glyma.13G010100 0.5kb downstream 0.5kb downstream 11053 true Chr13: 2735552-2746604 Glycine max
Glyma.13G010100 0.5kb downstream 0.5kb downstream 500 false Chr13: 2746105-2746604 Glycine max
Glyma.13G010100 1.0kb upstream 1.0kb upstream 11553 true Chr13: 2734552-2746104 Glycine max
Glyma.13G010100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 2734552-2735551 Glycine max
Glyma.13G010100 1.0kb downstream 1.0kb downstream 11553 true Chr13: 2735552-2747104 Glycine max
Glyma.13G010100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 2746105-2747104 Glycine max
Glyma.13G010100 2.0kb upstream 2.0kb upstream 12553 true Chr13: 2733552-2746104 Glycine max
Glyma.13G010100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 2733552-2735551 Glycine max
Glyma.13G010100 2.0kb downstream 2.0kb downstream 12553 true Chr13: 2735552-2748104 Glycine max
Glyma.13G010100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 2746105-2748104 Glycine max
Glyma.13G010100 5.0kb upstream 5.0kb upstream 15553 true Chr13: 2730552-2746104 Glycine max
Glyma.13G010100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 2730552-2735551 Glycine max
Glyma.13G010100 5.0kb downstream 5.0kb downstream 15553 true Chr13: 2735552-2751104 Glycine max
Glyma.13G010100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 2746105-2751104 Glycine max
Glyma.13G010100 10.0kb upstream 10.0kb upstream 20553 true Chr13: 2725552-2746104 Glycine max
Glyma.13G010100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 2725552-2735551 Glycine max
Glyma.13G010100 10.0kb downstream 10.0kb downstream 20553 true Chr13: 2735552-2756104 Glycine max
Glyma.13G010100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 2746105-2756104 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305949 5265 Fabidae View MSA
124066498 5270 Rosid View MSA
123736490 5271 Pentapetalae View MSA
122788185 5272 Eudicot View MSA
122046932 5273 Angiosperm View MSA
121348478 5274 Embryophyte View MSA
123380877 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.11876 0.0 25.2254   Low
cufflinks 9.80408 0.0 29.5258    
cufflinks 8.97426 0.0 31.5253    
cufflinks 17.2295 0.0 54.2656    
cufflinks 9.38309 0.0 32.3379    
cufflinks 13.3266 0.0 40.8449    
cufflinks 36.954 0.0 128.154 High High
cufflinks 10.1786 0.0 34.9655    
cufflinks 12.932 0.0 40.4436    
cufflinks 1.213        
cufflinks 1.153        
cufflinks 1.776       High
cufflinks 0.939       Low
cufflinks 0.953       Low
cufflinks 1.411        
cufflinks 1.194        
cufflinks 1.026        
cufflinks 1.952       High
cufflinks 1.598       High
cufflinks 1.305        
cufflinks 0.862       Low
cufflinks 1.234        
cufflinks 1.177        
cufflinks 1.194        
cufflinks 1.189        
cufflinks 1.712       High

0 Strain