Gene : Glyma.13G004000 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG1108 - Predicted heme/steroid binding protein Genomic Order:  40
Name:  ? Glyma.13G004000 Secondary Identifier:  ? PAC:30506040
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G004000 0.5kb upstream 0.5kb upstream 12842 true Chr13: 1106894-1119735 Glycine max
Glyma.13G004000 0.5kb upstream 0.5kb upstream 500 false Chr13: 1119236-1119735 Glycine max
Glyma.13G004000 0.5kb downstream 0.5kb downstream 12842 true Chr13: 1106394-1119235 Glycine max
Glyma.13G004000 0.5kb downstream 0.5kb downstream 500 false Chr13: 1106394-1106893 Glycine max
Glyma.13G004000 1.0kb upstream 1.0kb upstream 13342 true Chr13: 1106894-1120235 Glycine max
Glyma.13G004000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1119236-1120235 Glycine max
Glyma.13G004000 1.0kb downstream 1.0kb downstream 13342 true Chr13: 1105894-1119235 Glycine max
Glyma.13G004000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1105894-1106893 Glycine max
Glyma.13G004000 2.0kb upstream 2.0kb upstream 14342 true Chr13: 1106894-1121235 Glycine max
Glyma.13G004000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1119236-1121235 Glycine max
Glyma.13G004000 2.0kb downstream 2.0kb downstream 14342 true Chr13: 1104894-1119235 Glycine max
Glyma.13G004000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1104894-1106893 Glycine max
Glyma.13G004000 5.0kb upstream 5.0kb upstream 17342 true Chr13: 1106894-1124235 Glycine max
Glyma.13G004000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1119236-1124235 Glycine max
Glyma.13G004000 5.0kb downstream 5.0kb downstream 17342 true Chr13: 1101894-1119235 Glycine max
Glyma.13G004000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1101894-1106893 Glycine max
Glyma.13G004000 10.0kb upstream 10.0kb upstream 22342 true Chr13: 1106894-1129235 Glycine max
Glyma.13G004000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1119236-1129235 Glycine max
Glyma.13G004000 10.0kb downstream 10.0kb downstream 22342 true Chr13: 1096894-1119235 Glycine max
Glyma.13G004000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1096894-1106893 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306949 5265 Fabidae View MSA
124067008 5270 Rosid View MSA
123737474 5271 Pentapetalae View MSA
122791274 5272 Eudicot View MSA
122046664 5273 Angiosperm View MSA
123428884 5275 Viridiplantae View MSA
121351480 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.41267 0.0 20.151    
cufflinks 6.19147 0.0 21.98    
cufflinks 4.52249 0.0 17.5309   Low
cufflinks 6.00069 0.0 21.4422    
cufflinks 6.22729 0.0 22.2393    
cufflinks 10.6834 0.0 38.9171   High
cufflinks 8.80133 0.0 33.9325   High
cufflinks 5.92793 0.0 26.1709    
cufflinks 7.92642 0.0 31.2207    
cufflinks 0.211        
cufflinks 0.085       Low
cufflinks 0.156        
cufflinks 0.222       High
cufflinks 0.239       High
cufflinks 0.083       Low
cufflinks 0.164        
cufflinks 0.104        
cufflinks 0.204        
cufflinks 0.182        
cufflinks 0.16        
cufflinks 0.088       Low
cufflinks 0.191        
cufflinks 0.169        
cufflinks 0.096       Low
cufflinks 0.182        
cufflinks 0.113        

0 Strain