Gene : Glyma.12G190800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN Genomic Order:  1908
Name:  ? Glyma.12G190800 Secondary Identifier:  ? PAC:30546766
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G190800 0.5kb upstream 0.5kb upstream 4735 true Chr12: 35243443-35248177 Glycine max
Glyma.12G190800 0.5kb upstream 0.5kb upstream 500 false Chr12: 35247678-35248177 Glycine max
Glyma.12G190800 0.5kb downstream 0.5kb downstream 4735 true Chr12: 35242943-35247677 Glycine max
Glyma.12G190800 0.5kb downstream 0.5kb downstream 500 false Chr12: 35242943-35243442 Glycine max
Glyma.12G190800 1.0kb upstream 1.0kb upstream 5235 true Chr12: 35243443-35248677 Glycine max
Glyma.12G190800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 35247678-35248677 Glycine max
Glyma.12G190800 1.0kb downstream 1.0kb downstream 5235 true Chr12: 35242443-35247677 Glycine max
Glyma.12G190800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 35242443-35243442 Glycine max
Glyma.12G190800 2.0kb upstream 2.0kb upstream 6235 true Chr12: 35243443-35249677 Glycine max
Glyma.12G190800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 35247678-35249677 Glycine max
Glyma.12G190800 2.0kb downstream 2.0kb downstream 6235 true Chr12: 35241443-35247677 Glycine max
Glyma.12G190800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 35241443-35243442 Glycine max
Glyma.12G190800 5.0kb upstream 5.0kb upstream 9235 true Chr12: 35243443-35252677 Glycine max
Glyma.12G190800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 35247678-35252677 Glycine max
Glyma.12G190800 5.0kb downstream 5.0kb downstream 9235 true Chr12: 35238443-35247677 Glycine max
Glyma.12G190800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 35238443-35243442 Glycine max
Glyma.12G190800 10.0kb upstream 10.0kb upstream 14235 true Chr12: 35243443-35257677 Glycine max
Glyma.12G190800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 35247678-35257677 Glycine max
Glyma.12G190800 10.0kb downstream 10.0kb downstream 14235 true Chr12: 35233443-35247677 Glycine max
Glyma.12G190800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 35233443-35243442 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301139 5265 Fabidae View MSA
124072102 5270 Rosid View MSA
123744750 5271 Pentapetalae View MSA
122788933 5272 Eudicot View MSA
122041616 5273 Angiosperm View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.7692 0.0 154.361 High  
cufflinks 24.6268 0.0 94.8226 High Low
cufflinks 39.1397 0.0 179.29 High  
cufflinks 28.6012 0.0 124.002 High  
cufflinks 30.0659 0.0 130.978 High  
cufflinks 39.9571 0.0 190.139 High  
cufflinks 21.3527 0.0 82.2033   Low
cufflinks 42.9996 0.0 228.575 High High
cufflinks 34.2638 0.0 137.927 High  
cufflinks 4.715       High
cufflinks 2.584       Low
cufflinks 4.457       High
cufflinks 3.81        
cufflinks 2.839       Low
cufflinks 5.168     High High
cufflinks 3.145        
cufflinks 4.51       High
cufflinks 3.417        
cufflinks 3.779        
cufflinks 2.73       Low
cufflinks 3.232        
cufflinks 3.099        
cufflinks 3.373        
cufflinks 3.548        
cufflinks 2.656       Low
cufflinks 3.931        

0 Strain