Gene : Glyma.12G200800 G. max Wm82.a2.v1
Defline:  (1 of 36) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  2008
Name:  ? Glyma.12G200800 Secondary Identifier:  ? PAC:30548578
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G200800 0.5kb upstream 0.5kb upstream 1172 true Chr12: 36170922-36172093 Glycine max
Glyma.12G200800 0.5kb upstream 0.5kb upstream 500 false Chr12: 36170922-36171421 Glycine max
Glyma.12G200800 0.5kb downstream 0.5kb downstream 1172 true Chr12: 36171422-36172593 Glycine max
Glyma.12G200800 0.5kb downstream 0.5kb downstream 500 false Chr12: 36172094-36172593 Glycine max
Glyma.12G200800 1.0kb upstream 1.0kb upstream 1672 true Chr12: 36170422-36172093 Glycine max
Glyma.12G200800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 36170422-36171421 Glycine max
Glyma.12G200800 1.0kb downstream 1.0kb downstream 1672 true Chr12: 36171422-36173093 Glycine max
Glyma.12G200800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 36172094-36173093 Glycine max
Glyma.12G200800 2.0kb upstream 2.0kb upstream 2672 true Chr12: 36169422-36172093 Glycine max
Glyma.12G200800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 36169422-36171421 Glycine max
Glyma.12G200800 2.0kb downstream 2.0kb downstream 2672 true Chr12: 36171422-36174093 Glycine max
Glyma.12G200800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 36172094-36174093 Glycine max
Glyma.12G200800 5.0kb upstream 5.0kb upstream 5672 true Chr12: 36166422-36172093 Glycine max
Glyma.12G200800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 36166422-36171421 Glycine max
Glyma.12G200800 5.0kb downstream 5.0kb downstream 5672 true Chr12: 36171422-36177093 Glycine max
Glyma.12G200800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 36172094-36177093 Glycine max
Glyma.12G200800 10.0kb upstream 10.0kb upstream 10672 true Chr12: 36161422-36172093 Glycine max
Glyma.12G200800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 36161422-36171421 Glycine max
Glyma.12G200800 10.0kb downstream 10.0kb downstream 10672 true Chr12: 36171422-36182093 Glycine max
Glyma.12G200800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 36172094-36182093 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314984 5265 Fabidae View MSA
124074460 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.18382 0.0 4.40816    
cufflinks 0.190171 0.0 0.762178 Low Low
cufflinks 0.637201 0.0 2.43196    
cufflinks 0.723924 0.0 2.75144    
cufflinks 4.93787 0.0 16.4816   High
cufflinks 3.018 0.0 10.5922    
cufflinks 0.147004 0.0 0.596309 Low Low
cufflinks 0.499142 0.0 1.92571    
cufflinks 10.9048 0.0 32.3509   High
cufflinks 5.123        
cufflinks 3.127        
cufflinks 3.93        
cufflinks 3.138        
cufflinks 5.225        
cufflinks 10.543     High  
cufflinks 0.655        
cufflinks 24.484     High High
cufflinks 0.854        
cufflinks 0.586        
cufflinks 0.366       Low
cufflinks 14.23     High High
cufflinks 0.188       Low
cufflinks 1.358        
cufflinks 6.144     High  
cufflinks 0.368       Low
cufflinks 20.744     High High

0 Strain