Gene : Glyma.12G174500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22849//PTHR22849:SF31 - WDSAM1 PROTEIN Genomic Order:  1745
Name:  ? Glyma.12G174500 Secondary Identifier:  ? PAC:30547972
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G174500 0.5kb upstream 0.5kb upstream 5347 true Chr12: 33177134-33182480 Glycine max
Glyma.12G174500 0.5kb upstream 0.5kb upstream 500 false Chr12: 33181981-33182480 Glycine max
Glyma.12G174500 0.5kb downstream 0.5kb downstream 5347 true Chr12: 33176634-33181980 Glycine max
Glyma.12G174500 0.5kb downstream 0.5kb downstream 500 false Chr12: 33176634-33177133 Glycine max
Glyma.12G174500 1.0kb upstream 1.0kb upstream 5847 true Chr12: 33177134-33182980 Glycine max
Glyma.12G174500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 33181981-33182980 Glycine max
Glyma.12G174500 1.0kb downstream 1.0kb downstream 5847 true Chr12: 33176134-33181980 Glycine max
Glyma.12G174500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 33176134-33177133 Glycine max
Glyma.12G174500 2.0kb upstream 2.0kb upstream 6847 true Chr12: 33177134-33183980 Glycine max
Glyma.12G174500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 33181981-33183980 Glycine max
Glyma.12G174500 2.0kb downstream 2.0kb downstream 6847 true Chr12: 33175134-33181980 Glycine max
Glyma.12G174500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 33175134-33177133 Glycine max
Glyma.12G174500 5.0kb upstream 5.0kb upstream 9847 true Chr12: 33177134-33186980 Glycine max
Glyma.12G174500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 33181981-33186980 Glycine max
Glyma.12G174500 5.0kb downstream 5.0kb downstream 9847 true Chr12: 33172134-33181980 Glycine max
Glyma.12G174500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 33172134-33177133 Glycine max
Glyma.12G174500 10.0kb upstream 10.0kb upstream 14847 true Chr12: 33177134-33191980 Glycine max
Glyma.12G174500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 33181981-33191980 Glycine max
Glyma.12G174500 10.0kb downstream 10.0kb downstream 14847 true Chr12: 33167134-33181980 Glycine max
Glyma.12G174500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 33167134-33177133 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121608193 5273 Angiosperm Singleton cluster - no MSA
122239871 5265 Fabidae Singleton cluster - no MSA
123985034 5270 Rosid Singleton cluster - no MSA
123560496 5271 Pentapetalae Singleton cluster - no MSA
122595296 5272 Eudicot Singleton cluster - no MSA
120880467 5274 Embryophyte Singleton cluster - no MSA
122921332 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00570214 0.0 0.027416 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  

0 Strain