Gene : Glyma.12G081300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  813
Name:  ? Glyma.12G081300 Secondary Identifier:  ? PAC:30548770
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax DETOX1-PWY Glycine max pathologic  
Gmax DETOX1-PWY-1 Glycine max pathologic  
Gmax PWY-6854 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G081300 0.5kb upstream 0.5kb upstream 4750 true Chr12: 6422737-6427486 Glycine max
Glyma.12G081300 0.5kb upstream 0.5kb upstream 500 false Chr12: 6422737-6423236 Glycine max
Glyma.12G081300 0.5kb downstream 0.5kb downstream 4750 true Chr12: 6423237-6427986 Glycine max
Glyma.12G081300 0.5kb downstream 0.5kb downstream 500 false Chr12: 6427487-6427986 Glycine max
Glyma.12G081300 1.0kb upstream 1.0kb upstream 5250 true Chr12: 6422237-6427486 Glycine max
Glyma.12G081300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6422237-6423236 Glycine max
Glyma.12G081300 1.0kb downstream 1.0kb downstream 5250 true Chr12: 6423237-6428486 Glycine max
Glyma.12G081300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6427487-6428486 Glycine max
Glyma.12G081300 2.0kb upstream 2.0kb upstream 6250 true Chr12: 6421237-6427486 Glycine max
Glyma.12G081300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6421237-6423236 Glycine max
Glyma.12G081300 2.0kb downstream 2.0kb downstream 6250 true Chr12: 6423237-6429486 Glycine max
Glyma.12G081300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6427487-6429486 Glycine max
Glyma.12G081300 5.0kb upstream 5.0kb upstream 9250 true Chr12: 6418237-6427486 Glycine max
Glyma.12G081300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6418237-6423236 Glycine max
Glyma.12G081300 5.0kb downstream 5.0kb downstream 9250 true Chr12: 6423237-6432486 Glycine max
Glyma.12G081300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6427487-6432486 Glycine max
Glyma.12G081300 10.0kb upstream 10.0kb upstream 14250 true Chr12: 6413237-6427486 Glycine max
Glyma.12G081300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6413237-6423236 Glycine max
Glyma.12G081300 10.0kb downstream 10.0kb downstream 14250 true Chr12: 6423237-6437486 Glycine max
Glyma.12G081300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6427487-6437486 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299889 5265 Fabidae View MSA
124067425 5270 Rosid View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.8124 0.0 213.238 High  
cufflinks 82.9228 0.0 317.914 High High
cufflinks 10.6056 0.0 36.2046   Low
cufflinks 47.2454 0.0 166.721 High  
cufflinks 40.3921 0.0 139.617 High  
cufflinks 20.6134 0.0 62.6618    
cufflinks 93.2158 0.0 368.868 High High
cufflinks 30.6964 0.0 105.343 High  
cufflinks 30.2962 0.0 104.037 High  
cufflinks 4.194        
cufflinks 0.579       Low
cufflinks 3.235        
cufflinks 3.775        
cufflinks 4.293        
cufflinks 0.837       Low
cufflinks 19.83     High High
cufflinks 0.837       Low
cufflinks 5.69        
cufflinks 5.269        
cufflinks 17.581     High High
cufflinks 0.911       Low
cufflinks 20.714     High High
cufflinks 18.246     High High
cufflinks 0.568       Low
cufflinks 25.814     High High
cufflinks 1.223        

0 Strain