Gene : Glyma.12G086600 G. max Wm82.a2.v1
Defline:  (1 of 3) PF02238 - Cytochrome c oxidase subunit VIIa (COX7a) Genomic Order:  866
Name:  ? Glyma.12G086600 Secondary Identifier:  ? PAC:30548859
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G086600 0.5kb upstream 0.5kb upstream 2444 true Chr12: 7001432-7003875 Glycine max
Glyma.12G086600 0.5kb upstream 0.5kb upstream 500 false Chr12: 7003376-7003875 Glycine max
Glyma.12G086600 0.5kb downstream 0.5kb downstream 2444 true Chr12: 7000932-7003375 Glycine max
Glyma.12G086600 0.5kb downstream 0.5kb downstream 500 false Chr12: 7000932-7001431 Glycine max
Glyma.12G086600 1.0kb upstream 1.0kb upstream 2944 true Chr12: 7001432-7004375 Glycine max
Glyma.12G086600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7003376-7004375 Glycine max
Glyma.12G086600 1.0kb downstream 1.0kb downstream 2944 true Chr12: 7000432-7003375 Glycine max
Glyma.12G086600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7000432-7001431 Glycine max
Glyma.12G086600 2.0kb upstream 2.0kb upstream 3944 true Chr12: 7001432-7005375 Glycine max
Glyma.12G086600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7003376-7005375 Glycine max
Glyma.12G086600 2.0kb downstream 2.0kb downstream 3944 true Chr12: 6999432-7003375 Glycine max
Glyma.12G086600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6999432-7001431 Glycine max
Glyma.12G086600 5.0kb upstream 5.0kb upstream 6944 true Chr12: 7001432-7008375 Glycine max
Glyma.12G086600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7003376-7008375 Glycine max
Glyma.12G086600 5.0kb downstream 5.0kb downstream 6944 true Chr12: 6996432-7003375 Glycine max
Glyma.12G086600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6996432-7001431 Glycine max
Glyma.12G086600 10.0kb upstream 10.0kb upstream 11944 true Chr12: 7001432-7013375 Glycine max
Glyma.12G086600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7003376-7013375 Glycine max
Glyma.12G086600 10.0kb downstream 10.0kb downstream 11944 true Chr12: 6991432-7003375 Glycine max
Glyma.12G086600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6991432-7001431 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315238 5265 Fabidae View MSA
124073871 5270 Rosid View MSA
123749825 5271 Pentapetalae View MSA
122797532 5272 Eudicot View MSA
122045063 5273 Angiosperm View MSA
121348679 5274 Embryophyte View MSA
123380966 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.3599 0.0 131.731 High  
cufflinks 57.7532 0.0 154.143 High  
cufflinks 52.1845 0.0 139.224 High  
cufflinks 43.0774 0.0 115.127 High Low
cufflinks 109.406 0.0 300.32 High  
cufflinks 160.345 0.0 458.045 High High
cufflinks 66.6322 0.0 178.2 High  
cufflinks 80.5821 0.0 217.061 High  
cufflinks 90.233 0.0 244.658 High  
cufflinks 36.951     High High
cufflinks 18.88     High  
cufflinks 15.546     High  
cufflinks 54.24     High High
cufflinks 61.762     High High
cufflinks 19.646     High  
cufflinks 17.649     High  
cufflinks 22.014     High  
cufflinks 22.82     High  
cufflinks 21.117     High  
cufflinks 14.784     High Low
cufflinks 20.796     High  
cufflinks 15.633     High  
cufflinks 18.152     High  
cufflinks 20.505     High  
cufflinks 16.513     High  
cufflinks 25.495     High  

0 Strain