Gene : Glyma.12G086400 G. max Wm82.a2.v1
Defline:  (1 of 55) PF04434 - SWIM zinc finger (SWIM) Genomic Order:  864
Name:  ? Glyma.12G086400 Secondary Identifier:  ? PAC:30545397
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G086400 0.5kb upstream 0.5kb upstream 2396 true Chr12: 6991629-6994024 Glycine max
Glyma.12G086400 0.5kb upstream 0.5kb upstream 500 false Chr12: 6993525-6994024 Glycine max
Glyma.12G086400 0.5kb downstream 0.5kb downstream 2396 true Chr12: 6991129-6993524 Glycine max
Glyma.12G086400 0.5kb downstream 0.5kb downstream 500 false Chr12: 6991129-6991628 Glycine max
Glyma.12G086400 1.0kb upstream 1.0kb upstream 2896 true Chr12: 6991629-6994524 Glycine max
Glyma.12G086400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6993525-6994524 Glycine max
Glyma.12G086400 1.0kb downstream 1.0kb downstream 2896 true Chr12: 6990629-6993524 Glycine max
Glyma.12G086400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6990629-6991628 Glycine max
Glyma.12G086400 2.0kb upstream 2.0kb upstream 3896 true Chr12: 6991629-6995524 Glycine max
Glyma.12G086400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6993525-6995524 Glycine max
Glyma.12G086400 2.0kb downstream 2.0kb downstream 3896 true Chr12: 6989629-6993524 Glycine max
Glyma.12G086400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6989629-6991628 Glycine max
Glyma.12G086400 5.0kb upstream 5.0kb upstream 6896 true Chr12: 6991629-6998524 Glycine max
Glyma.12G086400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6993525-6998524 Glycine max
Glyma.12G086400 5.0kb downstream 5.0kb downstream 6896 true Chr12: 6986629-6993524 Glycine max
Glyma.12G086400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6986629-6991628 Glycine max
Glyma.12G086400 10.0kb upstream 10.0kb upstream 11896 true Chr12: 6991629-7003524 Glycine max
Glyma.12G086400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6993525-7003524 Glycine max
Glyma.12G086400 10.0kb downstream 10.0kb downstream 11896 true Chr12: 6981629-6993524 Glycine max
Glyma.12G086400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6981629-6991628 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121611716 5273 Angiosperm Singleton cluster - no MSA
122244955 5265 Fabidae Singleton cluster - no MSA
123989178 5270 Rosid Singleton cluster - no MSA
123564306 5271 Pentapetalae Singleton cluster - no MSA
122599076 5272 Eudicot Singleton cluster - no MSA
120883944 5274 Embryophyte Singleton cluster - no MSA
122924755 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain