Gene : Glyma.12G100500 G. max Wm82.a2.v1
Defline:  (1 of 3) 4.1.3.1 - Isocitrate lyase / Isocitritase Genomic Order:  1005
Name:  ? Glyma.12G100500 Secondary Identifier:  ? PAC:30548793
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G100500 0.5kb upstream 0.5kb upstream 4213 true Chr12: 8799970-8804182 Glycine max
Glyma.12G100500 0.5kb upstream 0.5kb upstream 500 false Chr12: 8803683-8804182 Glycine max
Glyma.12G100500 0.5kb downstream 0.5kb downstream 4213 true Chr12: 8799470-8803682 Glycine max
Glyma.12G100500 0.5kb downstream 0.5kb downstream 500 false Chr12: 8799470-8799969 Glycine max
Glyma.12G100500 1.0kb upstream 1.0kb upstream 4713 true Chr12: 8799970-8804682 Glycine max
Glyma.12G100500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 8803683-8804682 Glycine max
Glyma.12G100500 1.0kb downstream 1.0kb downstream 4713 true Chr12: 8798970-8803682 Glycine max
Glyma.12G100500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 8798970-8799969 Glycine max
Glyma.12G100500 2.0kb upstream 2.0kb upstream 5713 true Chr12: 8799970-8805682 Glycine max
Glyma.12G100500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 8803683-8805682 Glycine max
Glyma.12G100500 2.0kb downstream 2.0kb downstream 5713 true Chr12: 8797970-8803682 Glycine max
Glyma.12G100500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 8797970-8799969 Glycine max
Glyma.12G100500 5.0kb upstream 5.0kb upstream 8713 true Chr12: 8799970-8808682 Glycine max
Glyma.12G100500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 8803683-8808682 Glycine max
Glyma.12G100500 5.0kb downstream 5.0kb downstream 8713 true Chr12: 8794970-8803682 Glycine max
Glyma.12G100500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 8794970-8799969 Glycine max
Glyma.12G100500 10.0kb upstream 10.0kb upstream 13713 true Chr12: 8799970-8813682 Glycine max
Glyma.12G100500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 8803683-8813682 Glycine max
Glyma.12G100500 10.0kb downstream 10.0kb downstream 13713 true Chr12: 8789970-8803682 Glycine max
Glyma.12G100500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 8789970-8799969 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301201 5265 Fabidae View MSA
124069108 5270 Rosid View MSA
123740253 5271 Pentapetalae View MSA
122791392 5272 Eudicot View MSA
122049985 5273 Angiosperm View MSA
121347561 5274 Embryophyte View MSA
123428552 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.924427 0.0 3.11297    
cufflinks 0.0135088 0.0 0.0577004 Low Low
cufflinks 35.3141 0.0 103.111 High High
cufflinks 0.504333 0.0 1.79536    
cufflinks 0.500934 0.0 1.7861    
cufflinks 1.65225 0.0 5.14423    
cufflinks 0.470348 0.0 1.68348    
cufflinks 0.31295 0.0 1.1481    
cufflinks 0.550709 0.0 1.94984    
cufflinks 0.016     Low Low
cufflinks 0.704        
cufflinks 12.669     High High
cufflinks 0.118        
cufflinks 0.602        
cufflinks 0.8        
cufflinks 0.187        
cufflinks 0.065     Low  
cufflinks 0.071     Low  
cufflinks 0.049     Low Low
cufflinks 0.738        
cufflinks 0.185        
cufflinks 0.163        
cufflinks 0.053     Low  
cufflinks 0.636        
cufflinks 0.421        
cufflinks 0.213        

0 Strain