Gene : Glyma.12G022800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31692:SF4 - EXPANSIN-LIKE A1-RELATED Genomic Order:  228
Name:  ? Glyma.12G022800 Secondary Identifier:  ? PAC:30548102
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G022800 0.5kb upstream 0.5kb upstream 2608 true Chr12: 1675697-1678304 Glycine max
Glyma.12G022800 0.5kb upstream 0.5kb upstream 500 false Chr12: 1677805-1678304 Glycine max
Glyma.12G022800 0.5kb downstream 0.5kb downstream 2608 true Chr12: 1675197-1677804 Glycine max
Glyma.12G022800 0.5kb downstream 0.5kb downstream 500 false Chr12: 1675197-1675696 Glycine max
Glyma.12G022800 1.0kb upstream 1.0kb upstream 3108 true Chr12: 1675697-1678804 Glycine max
Glyma.12G022800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1677805-1678804 Glycine max
Glyma.12G022800 1.0kb downstream 1.0kb downstream 3108 true Chr12: 1674697-1677804 Glycine max
Glyma.12G022800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1674697-1675696 Glycine max
Glyma.12G022800 2.0kb upstream 2.0kb upstream 4108 true Chr12: 1675697-1679804 Glycine max
Glyma.12G022800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1677805-1679804 Glycine max
Glyma.12G022800 2.0kb downstream 2.0kb downstream 4108 true Chr12: 1673697-1677804 Glycine max
Glyma.12G022800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1673697-1675696 Glycine max
Glyma.12G022800 5.0kb upstream 5.0kb upstream 7108 true Chr12: 1675697-1682804 Glycine max
Glyma.12G022800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1677805-1682804 Glycine max
Glyma.12G022800 5.0kb downstream 5.0kb downstream 7108 true Chr12: 1670697-1677804 Glycine max
Glyma.12G022800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1670697-1675696 Glycine max
Glyma.12G022800 10.0kb upstream 10.0kb upstream 12108 true Chr12: 1675697-1687804 Glycine max
Glyma.12G022800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1677805-1687804 Glycine max
Glyma.12G022800 10.0kb downstream 10.0kb downstream 12108 true Chr12: 1665697-1677804 Glycine max
Glyma.12G022800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1665697-1675696 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299918 5265 Fabidae View MSA
124063116 5270 Rosid View MSA
123739587 5271 Pentapetalae View MSA
122785615 5272 Eudicot View MSA
122042929 5273 Angiosperm View MSA
121310045 5274 Embryophyte View MSA
123347644 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.31772 0.0 7.764   Low
cufflinks 1.3496 0.0 5.92538   Low
cufflinks 5.70841 0.0 25.5648    
cufflinks 11.4333 0.0 43.0291    
cufflinks 10.9527 0.0 40.9282    
cufflinks 6.20135 0.0 26.7845    
cufflinks 18.2787 0.0 63.7458   High
cufflinks 3.54937 0.0 15.8368    
cufflinks 6.67168 0.0 28.0095    
cufflinks 10.39     High  
cufflinks 30.142     High High
cufflinks 3.086        
cufflinks 3.198        
cufflinks 2.029        
cufflinks 83.246     High High
cufflinks 2.206        
cufflinks 31.092     High High
cufflinks 1.445        
cufflinks 0.705       Low
cufflinks 2.624        
cufflinks 33.364     High High
cufflinks 1.698        
cufflinks 1.252       Low
cufflinks 12.373     High  
cufflinks 2.614        
cufflinks 50.798     High High

0 Strain