Gene : Glyma.11G248000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24322:SF619 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, CHLOROPLASTIC Genomic Order:  2480
Name:  ? Glyma.11G248000 Secondary Identifier:  ? PAC:30529098
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax FASYN-ELONG-PWY Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-5971 Glycine max pathologic  
Gmax PWY-5973 Glycine max pathologic  
Gmax PWY-5989 Glycine max pathologic  
Gmax PWY-6282 Glycine max pathologic  
Gmax PWY-7388 Glycine max pathologic  
Gmax PWY-7663 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G248000 0.5kb upstream 0.5kb upstream 4805 true Chr11: 34056859-34061663 Glycine max
Glyma.11G248000 0.5kb upstream 0.5kb upstream 500 false Chr11: 34061164-34061663 Glycine max
Glyma.11G248000 0.5kb downstream 0.5kb downstream 4805 true Chr11: 34056359-34061163 Glycine max
Glyma.11G248000 0.5kb downstream 0.5kb downstream 500 false Chr11: 34056359-34056858 Glycine max
Glyma.11G248000 1.0kb upstream 1.0kb upstream 5305 true Chr11: 34056859-34062163 Glycine max
Glyma.11G248000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34061164-34062163 Glycine max
Glyma.11G248000 1.0kb downstream 1.0kb downstream 5305 true Chr11: 34055859-34061163 Glycine max
Glyma.11G248000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34055859-34056858 Glycine max
Glyma.11G248000 2.0kb upstream 2.0kb upstream 6305 true Chr11: 34056859-34063163 Glycine max
Glyma.11G248000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34061164-34063163 Glycine max
Glyma.11G248000 2.0kb downstream 2.0kb downstream 6305 true Chr11: 34054859-34061163 Glycine max
Glyma.11G248000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34054859-34056858 Glycine max
Glyma.11G248000 5.0kb upstream 5.0kb upstream 9305 true Chr11: 34056859-34066163 Glycine max
Glyma.11G248000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34061164-34066163 Glycine max
Glyma.11G248000 5.0kb downstream 5.0kb downstream 9305 true Chr11: 34051859-34061163 Glycine max
Glyma.11G248000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34051859-34056858 Glycine max
Glyma.11G248000 10.0kb upstream 10.0kb upstream 14305 true Chr11: 34056859-34071163 Glycine max
Glyma.11G248000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34061164-34071163 Glycine max
Glyma.11G248000 10.0kb downstream 10.0kb downstream 14305 true Chr11: 34046859-34061163 Glycine max
Glyma.11G248000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34046859-34056858 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030391 5273 Angiosperm View MSA
122246900 5265 Fabidae Singleton cluster - no MSA
123990780 5270 Rosid Singleton cluster - no MSA
123565781 5271 Pentapetalae Singleton cluster - no MSA
122600544 5272 Eudicot Singleton cluster - no MSA
121299569 5274 Embryophyte View MSA
123337426 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.5344 0.0 71.9464    
cufflinks 31.1703 0.0 106.365 High  
cufflinks 8.50943 0.0 30.2813   Low
cufflinks 32.044 0.0 109.95 High  
cufflinks 35.0164 0.0 122.024 High  
cufflinks 25.9404 0.0 87.0585 High  
cufflinks 51.523 0.0 193.552 High High
cufflinks 36.432 0.0 127.814 High  
cufflinks 22.7893 0.0 75.9112 High  
cufflinks 8.998     High  
cufflinks 0.469       Low
cufflinks 3.283        
cufflinks 8.25     High  
cufflinks 11.688     High High
cufflinks 0.413       Low
cufflinks 6.694        
cufflinks 3.598        
cufflinks 6.577        
cufflinks 7.759     High  
cufflinks 4.417        
cufflinks 1.27        
cufflinks 5.724        
cufflinks 8.559     High  
cufflinks 0.728       Low
cufflinks 5.67        
cufflinks 1.765        

0 Strain