Gene : Glyma.11G213600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21320:SF3 - CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIAL Genomic Order:  2136
Name:  ? Glyma.11G213600 Secondary Identifier:  ? PAC:30528878
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G213600 0.5kb upstream 0.5kb upstream 4460 true Chr11: 30652359-30656818 Glycine max
Glyma.11G213600 0.5kb upstream 0.5kb upstream 500 false Chr11: 30656319-30656818 Glycine max
Glyma.11G213600 0.5kb downstream 0.5kb downstream 4460 true Chr11: 30651859-30656318 Glycine max
Glyma.11G213600 0.5kb downstream 0.5kb downstream 500 false Chr11: 30651859-30652358 Glycine max
Glyma.11G213600 1.0kb upstream 1.0kb upstream 4960 true Chr11: 30652359-30657318 Glycine max
Glyma.11G213600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30656319-30657318 Glycine max
Glyma.11G213600 1.0kb downstream 1.0kb downstream 4960 true Chr11: 30651359-30656318 Glycine max
Glyma.11G213600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30651359-30652358 Glycine max
Glyma.11G213600 2.0kb upstream 2.0kb upstream 5960 true Chr11: 30652359-30658318 Glycine max
Glyma.11G213600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30656319-30658318 Glycine max
Glyma.11G213600 2.0kb downstream 2.0kb downstream 5960 true Chr11: 30650359-30656318 Glycine max
Glyma.11G213600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30650359-30652358 Glycine max
Glyma.11G213600 5.0kb upstream 5.0kb upstream 8960 true Chr11: 30652359-30661318 Glycine max
Glyma.11G213600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30656319-30661318 Glycine max
Glyma.11G213600 5.0kb downstream 5.0kb downstream 8960 true Chr11: 30647359-30656318 Glycine max
Glyma.11G213600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30647359-30652358 Glycine max
Glyma.11G213600 10.0kb upstream 10.0kb upstream 13960 true Chr11: 30652359-30666318 Glycine max
Glyma.11G213600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30656319-30666318 Glycine max
Glyma.11G213600 10.0kb downstream 10.0kb downstream 13960 true Chr11: 30642359-30656318 Glycine max
Glyma.11G213600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30642359-30652358 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246933 5265 Fabidae Singleton cluster - no MSA
123990808 5270 Rosid Singleton cluster - no MSA
123747181 5271 Pentapetalae View MSA
122787948 5272 Eudicot View MSA
122044344 5273 Angiosperm View MSA
121347524 5274 Embryophyte View MSA
123425070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.59592 0.0 21.6258   High
cufflinks 1.93888 0.0 11.5298   Low
cufflinks 2.40611 0.0 9.78073    
cufflinks 2.59691 0.0 15.2432    
cufflinks 2.89778 0.0 15.1862    
cufflinks 2.24333 0.0 9.55931    
cufflinks 2.05562 0.0 11.798    
cufflinks 2.16888 0.0 12.3718    
cufflinks 3.31565 0.0 16.8795    
cufflinks 0.353        
cufflinks 0.145       Low
cufflinks 0.465       High
cufflinks 0.46       High
cufflinks 0.532       High
cufflinks 0.352        
cufflinks 0.299        
cufflinks 0.174       Low
cufflinks 0.395        
cufflinks 0.362        
cufflinks 0.317        
cufflinks 0.189       Low
cufflinks 0.363        
cufflinks 0.303        
cufflinks 0.219        
cufflinks 0.377        
cufflinks 0.178       Low

0 Strain