Gene : Glyma.11G210300 G. max Wm82.a2.v1
Defline:  (1 of 13) 2.5.1.36 - Trihydroxypterocarpan dimethylallyltransferase / Glyceollin synthase Genomic Order:  2103
Name:  ? Glyma.11G210300 Secondary Identifier:  ? PAC:30527801
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2762 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G210300 0.5kb upstream 0.5kb upstream 10444 true Chr11: 30238668-30249111 Glycine max
Glyma.11G210300 0.5kb upstream 0.5kb upstream 500 false Chr11: 30248612-30249111 Glycine max
Glyma.11G210300 0.5kb downstream 0.5kb downstream 10444 true Chr11: 30238168-30248611 Glycine max
Glyma.11G210300 0.5kb downstream 0.5kb downstream 500 false Chr11: 30238168-30238667 Glycine max
Glyma.11G210300 1.0kb upstream 1.0kb upstream 10944 true Chr11: 30238668-30249611 Glycine max
Glyma.11G210300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 30248612-30249611 Glycine max
Glyma.11G210300 1.0kb downstream 1.0kb downstream 10944 true Chr11: 30237668-30248611 Glycine max
Glyma.11G210300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 30237668-30238667 Glycine max
Glyma.11G210300 2.0kb upstream 2.0kb upstream 11944 true Chr11: 30238668-30250611 Glycine max
Glyma.11G210300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 30248612-30250611 Glycine max
Glyma.11G210300 2.0kb downstream 2.0kb downstream 11944 true Chr11: 30236668-30248611 Glycine max
Glyma.11G210300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 30236668-30238667 Glycine max
Glyma.11G210300 5.0kb upstream 5.0kb upstream 14944 true Chr11: 30238668-30253611 Glycine max
Glyma.11G210300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 30248612-30253611 Glycine max
Glyma.11G210300 5.0kb downstream 5.0kb downstream 14944 true Chr11: 30233668-30248611 Glycine max
Glyma.11G210300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 30233668-30238667 Glycine max
Glyma.11G210300 10.0kb upstream 10.0kb upstream 19944 true Chr11: 30238668-30258611 Glycine max
Glyma.11G210300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 30248612-30258611 Glycine max
Glyma.11G210300 10.0kb downstream 10.0kb downstream 19944 true Chr11: 30228668-30248611 Glycine max
Glyma.11G210300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 30228668-30238667 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658057 5273 Angiosperm View MSA
122254386 5265 Fabidae View MSA
124041001 5270 Rosid View MSA
123612085 5271 Pentapetalae View MSA
122646609 5272 Eudicot View MSA
120930074 5274 Embryophyte View MSA
123426888 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.27771 0.0 17.8202    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.507147 0.0 3.27286    
cufflinks 0.0189079 0.0 0.104547 Low Low
cufflinks 1.25029 0.0 7.17215    
cufflinks 6.3455 0.0 27.2803    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.93466 0.0 10.1116    
cufflinks 0.004     Low  
cufflinks 8.228     High High
cufflinks 0.059     Low  
cufflinks 0.058     Low  
cufflinks 0.019     Low  
cufflinks 0.727        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.001     Low Low
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.966     High High
cufflinks 0.001     Low Low
cufflinks 0.002     Low Low
cufflinks 5.269       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.703       High

0 Strain