Gene : Glyma.11G228300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22950//PTHR22950:SF260 - AMINO ACID TRANSPORTER Genomic Order:  2283
Name:  ? Glyma.11G228300 Secondary Identifier:  ? PAC:30529785
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G228300 0.5kb upstream 0.5kb upstream 5626 true Chr11: 32365229-32370854 Glycine max
Glyma.11G228300 0.5kb upstream 0.5kb upstream 500 false Chr11: 32365229-32365728 Glycine max
Glyma.11G228300 0.5kb downstream 0.5kb downstream 5626 true Chr11: 32365729-32371354 Glycine max
Glyma.11G228300 0.5kb downstream 0.5kb downstream 500 false Chr11: 32370855-32371354 Glycine max
Glyma.11G228300 1.0kb upstream 1.0kb upstream 6126 true Chr11: 32364729-32370854 Glycine max
Glyma.11G228300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32364729-32365728 Glycine max
Glyma.11G228300 1.0kb downstream 1.0kb downstream 6126 true Chr11: 32365729-32371854 Glycine max
Glyma.11G228300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32370855-32371854 Glycine max
Glyma.11G228300 2.0kb upstream 2.0kb upstream 7126 true Chr11: 32363729-32370854 Glycine max
Glyma.11G228300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32363729-32365728 Glycine max
Glyma.11G228300 2.0kb downstream 2.0kb downstream 7126 true Chr11: 32365729-32372854 Glycine max
Glyma.11G228300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32370855-32372854 Glycine max
Glyma.11G228300 5.0kb upstream 5.0kb upstream 10126 true Chr11: 32360729-32370854 Glycine max
Glyma.11G228300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32360729-32365728 Glycine max
Glyma.11G228300 5.0kb downstream 5.0kb downstream 10126 true Chr11: 32365729-32375854 Glycine max
Glyma.11G228300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32370855-32375854 Glycine max
Glyma.11G228300 10.0kb upstream 10.0kb upstream 15126 true Chr11: 32355729-32370854 Glycine max
Glyma.11G228300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32355729-32365728 Glycine max
Glyma.11G228300 10.0kb downstream 10.0kb downstream 15126 true Chr11: 32365729-32380854 Glycine max
Glyma.11G228300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32370855-32380854 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314633 5265 Fabidae View MSA
124073275 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.862812 0.0 3.04091   Low
cufflinks 6.43184 0.0 17.7708    
cufflinks 5.65424 0.0 15.7888    
cufflinks 8.97817 0.0 24.2524    
cufflinks 4.18772 0.0 12.1014    
cufflinks 1.28284 0.0 4.34312   Low
cufflinks 20.9467 0.0 56.243   High
cufflinks 8.70657 0.0 23.5489    
cufflinks 7.29383 0.0 19.9397    
cufflinks 2.462        
cufflinks 0.924        
cufflinks 1.162        
cufflinks 2.446        
cufflinks 0.411       Low
cufflinks 0.248       Low
cufflinks 1.954        
cufflinks 1.649        
cufflinks 0.742        
cufflinks 3.013       High
cufflinks 1.26        
cufflinks 1.419        
cufflinks 1.601        
cufflinks 2.58       High
cufflinks 1.396        
cufflinks 1.399        
cufflinks 1.339        

0 Strain