Gene : Glyma.11G154800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 Genomic Order:  1548
Name:  ? Glyma.11G154800 Secondary Identifier:  ? PAC:30531508
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G154800 0.5kb upstream 0.5kb upstream 9393 true Chr11: 12631057-12640449 Glycine max
Glyma.11G154800 0.5kb upstream 0.5kb upstream 500 false Chr11: 12631057-12631556 Glycine max
Glyma.11G154800 0.5kb downstream 0.5kb downstream 9393 true Chr11: 12631557-12640949 Glycine max
Glyma.11G154800 0.5kb downstream 0.5kb downstream 500 false Chr11: 12640450-12640949 Glycine max
Glyma.11G154800 1.0kb upstream 1.0kb upstream 9893 true Chr11: 12630557-12640449 Glycine max
Glyma.11G154800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12630557-12631556 Glycine max
Glyma.11G154800 1.0kb downstream 1.0kb downstream 9893 true Chr11: 12631557-12641449 Glycine max
Glyma.11G154800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12640450-12641449 Glycine max
Glyma.11G154800 2.0kb upstream 2.0kb upstream 10893 true Chr11: 12629557-12640449 Glycine max
Glyma.11G154800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12629557-12631556 Glycine max
Glyma.11G154800 2.0kb downstream 2.0kb downstream 10893 true Chr11: 12631557-12642449 Glycine max
Glyma.11G154800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12640450-12642449 Glycine max
Glyma.11G154800 5.0kb upstream 5.0kb upstream 13893 true Chr11: 12626557-12640449 Glycine max
Glyma.11G154800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12626557-12631556 Glycine max
Glyma.11G154800 5.0kb downstream 5.0kb downstream 13893 true Chr11: 12631557-12645449 Glycine max
Glyma.11G154800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12640450-12645449 Glycine max
Glyma.11G154800 10.0kb upstream 10.0kb upstream 18893 true Chr11: 12621557-12640449 Glycine max
Glyma.11G154800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12621557-12631556 Glycine max
Glyma.11G154800 10.0kb downstream 10.0kb downstream 18893 true Chr11: 12631557-12650449 Glycine max
Glyma.11G154800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12640450-12650449 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300627 5265 Fabidae View MSA
124067561 5270 Rosid View MSA
123738895 5271 Pentapetalae View MSA
122788096 5272 Eudicot View MSA
122041978 5273 Angiosperm View MSA
121346055 5274 Embryophyte View MSA
123424068 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.48302 0.0 14.6638   High
cufflinks 2.88291 0.0 7.97991    
cufflinks 4.97305 0.0 13.3242   High
cufflinks 2.8795 0.0 7.97134    
cufflinks 2.47627 0.0 6.95862    
cufflinks 2.8478 0.0 7.88685    
cufflinks 3.14805 0.0 8.66638    
cufflinks 1.58769 0.0 4.70615   Low
cufflinks 3.4713 0.0 9.47239    
cufflinks 1.231       Low
cufflinks 17.24     High High
cufflinks 2.933        
cufflinks 1.623        
cufflinks 1.691        
cufflinks 25.622     High High
cufflinks 2.631        
cufflinks 3.017        
cufflinks 2.659        
cufflinks 2.402        
cufflinks 2.553        
cufflinks 23.884     High High
cufflinks 3.255        
cufflinks 3.476        
cufflinks 8.774     High  
cufflinks 2.241        
cufflinks 13.169     High High

0 Strain