Gene : Glyma.11G111500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22298:SF29 - ENDOGLUCANASE 22-RELATED Genomic Order:  1115
Name:  ? Glyma.11G111500 Secondary Identifier:  ? PAC:30531591
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G111500 0.5kb upstream 0.5kb upstream 7576 true Chr11: 8502262-8509837 Glycine max
Glyma.11G111500 0.5kb upstream 0.5kb upstream 500 false Chr11: 8509338-8509837 Glycine max
Glyma.11G111500 0.5kb downstream 0.5kb downstream 7576 true Chr11: 8501762-8509337 Glycine max
Glyma.11G111500 0.5kb downstream 0.5kb downstream 500 false Chr11: 8501762-8502261 Glycine max
Glyma.11G111500 1.0kb upstream 1.0kb upstream 8076 true Chr11: 8502262-8510337 Glycine max
Glyma.11G111500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8509338-8510337 Glycine max
Glyma.11G111500 1.0kb downstream 1.0kb downstream 8076 true Chr11: 8501262-8509337 Glycine max
Glyma.11G111500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8501262-8502261 Glycine max
Glyma.11G111500 2.0kb upstream 2.0kb upstream 9076 true Chr11: 8502262-8511337 Glycine max
Glyma.11G111500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8509338-8511337 Glycine max
Glyma.11G111500 2.0kb downstream 2.0kb downstream 9076 true Chr11: 8500262-8509337 Glycine max
Glyma.11G111500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8500262-8502261 Glycine max
Glyma.11G111500 5.0kb upstream 5.0kb upstream 12076 true Chr11: 8502262-8514337 Glycine max
Glyma.11G111500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8509338-8514337 Glycine max
Glyma.11G111500 5.0kb downstream 5.0kb downstream 12076 true Chr11: 8497262-8509337 Glycine max
Glyma.11G111500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8497262-8502261 Glycine max
Glyma.11G111500 10.0kb upstream 10.0kb upstream 17076 true Chr11: 8502262-8519337 Glycine max
Glyma.11G111500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8509338-8519337 Glycine max
Glyma.11G111500 10.0kb downstream 10.0kb downstream 17076 true Chr11: 8492262-8509337 Glycine max
Glyma.11G111500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8492262-8502261 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254910 5265 Fabidae View MSA
124074876 5270 Rosid View MSA
123753094 5271 Pentapetalae View MSA
122792910 5272 Eudicot View MSA
122045461 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8289 0.0 5.99795   Low
cufflinks 7.09598 0.0 19.6242    
cufflinks 2.16263 0.0 6.95861   Low
cufflinks 13.7545 0.0 36.7537   High
cufflinks 6.58394 0.0 18.2662    
cufflinks 2.40455 0.0 7.59202    
cufflinks 4.4759 0.0 12.9672    
cufflinks 7.0255 0.0 19.4277    
cufflinks 3.82116 0.0 11.3005    
cufflinks 2.742       High
cufflinks 0.068       Low
cufflinks 1.414        
cufflinks 1.133        
cufflinks 1.638        
cufflinks 0.236        
cufflinks 1.123        
cufflinks 0.393        
cufflinks 4.357       High
cufflinks 2.974       High
cufflinks 1.273        
cufflinks 0.171       Low
cufflinks 1.41        
cufflinks 1.583        
cufflinks 0.087       Low
cufflinks 1.027        
cufflinks 0.268        

0 Strain