Gene : Glyma.11G124200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31920:SF20 - B3 DOMAIN-CONTAINING PROTEIN REM23 Genomic Order:  1242
Name:  ? Glyma.11G124200 Secondary Identifier:  ? PAC:30530583
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G124200 0.5kb upstream 0.5kb upstream 3872 true Chr11: 9440642-9444513 Glycine max
Glyma.11G124200 0.5kb upstream 0.5kb upstream 500 false Chr11: 9444014-9444513 Glycine max
Glyma.11G124200 0.5kb downstream 0.5kb downstream 3872 true Chr11: 9440142-9444013 Glycine max
Glyma.11G124200 0.5kb downstream 0.5kb downstream 500 false Chr11: 9440142-9440641 Glycine max
Glyma.11G124200 1.0kb upstream 1.0kb upstream 4372 true Chr11: 9440642-9445013 Glycine max
Glyma.11G124200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9444014-9445013 Glycine max
Glyma.11G124200 1.0kb downstream 1.0kb downstream 4372 true Chr11: 9439642-9444013 Glycine max
Glyma.11G124200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9439642-9440641 Glycine max
Glyma.11G124200 2.0kb upstream 2.0kb upstream 5372 true Chr11: 9440642-9446013 Glycine max
Glyma.11G124200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9444014-9446013 Glycine max
Glyma.11G124200 2.0kb downstream 2.0kb downstream 5372 true Chr11: 9438642-9444013 Glycine max
Glyma.11G124200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9438642-9440641 Glycine max
Glyma.11G124200 5.0kb upstream 5.0kb upstream 8372 true Chr11: 9440642-9449013 Glycine max
Glyma.11G124200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9444014-9449013 Glycine max
Glyma.11G124200 5.0kb downstream 5.0kb downstream 8372 true Chr11: 9435642-9444013 Glycine max
Glyma.11G124200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9435642-9440641 Glycine max
Glyma.11G124200 10.0kb upstream 10.0kb upstream 13372 true Chr11: 9440642-9454013 Glycine max
Glyma.11G124200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9444014-9454013 Glycine max
Glyma.11G124200 10.0kb downstream 10.0kb downstream 13372 true Chr11: 9430642-9444013 Glycine max
Glyma.11G124200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9430642-9440641 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253548 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.982367 0.0 5.46624    
cufflinks 0.567995 0.0 5.08233    
cufflinks 5.60635 0.0 28.5523    
cufflinks 82.0526 0.0 468.844 High High
cufflinks 0.317116 0.0 2.53425    
cufflinks 0.0820365 0.0 0.331184 Low Low
cufflinks 25.5405 0.0 115.932 High High
cufflinks 0.352349 0.0 3.10615    
cufflinks 2.19517 0.0 12.7071    
cufflinks 0.015     Low  
cufflinks 0.003     Low Low
cufflinks 1.253       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.044     Low  
cufflinks 0.171        
cufflinks 0.019     Low  
cufflinks 1.553       High
cufflinks 0.115        
cufflinks 0.098        
cufflinks 0.005     Low  
cufflinks 0.167        
cufflinks 0.108        
cufflinks 0.003     Low Low
cufflinks 0.141        
cufflinks 0.002     Low Low

0 Strain