Gene : Glyma.11G091900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12548 - TRANSCRIPTION FACTOR DP Genomic Order:  919
Name:  ? Glyma.11G091900 Secondary Identifier:  ? PAC:30529594
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G091900 0.5kb upstream 0.5kb upstream 4033 true Chr11: 6953228-6957260 Glycine max
Glyma.11G091900 0.5kb upstream 0.5kb upstream 500 false Chr11: 6956761-6957260 Glycine max
Glyma.11G091900 0.5kb downstream 0.5kb downstream 4033 true Chr11: 6952728-6956760 Glycine max
Glyma.11G091900 0.5kb downstream 0.5kb downstream 500 false Chr11: 6952728-6953227 Glycine max
Glyma.11G091900 1.0kb upstream 1.0kb upstream 4533 true Chr11: 6953228-6957760 Glycine max
Glyma.11G091900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6956761-6957760 Glycine max
Glyma.11G091900 1.0kb downstream 1.0kb downstream 4533 true Chr11: 6952228-6956760 Glycine max
Glyma.11G091900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6952228-6953227 Glycine max
Glyma.11G091900 2.0kb upstream 2.0kb upstream 5533 true Chr11: 6953228-6958760 Glycine max
Glyma.11G091900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6956761-6958760 Glycine max
Glyma.11G091900 2.0kb downstream 2.0kb downstream 5533 true Chr11: 6951228-6956760 Glycine max
Glyma.11G091900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6951228-6953227 Glycine max
Glyma.11G091900 5.0kb upstream 5.0kb upstream 8533 true Chr11: 6953228-6961760 Glycine max
Glyma.11G091900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6956761-6961760 Glycine max
Glyma.11G091900 5.0kb downstream 5.0kb downstream 8533 true Chr11: 6948228-6956760 Glycine max
Glyma.11G091900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6948228-6953227 Glycine max
Glyma.11G091900 10.0kb upstream 10.0kb upstream 13533 true Chr11: 6953228-6966760 Glycine max
Glyma.11G091900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6956761-6966760 Glycine max
Glyma.11G091900 10.0kb downstream 10.0kb downstream 13533 true Chr11: 6943228-6956760 Glycine max
Glyma.11G091900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6943228-6953227 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255176 5265 Fabidae View MSA
123997008 5270 Rosid View MSA
123571374 5271 Pentapetalae View MSA
122606100 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7165 0.0 51.2553    
cufflinks 11.8425 0.0 52.796    
cufflinks 8.36939 0.0 44.0994    
cufflinks 9.37893 0.0 52.2852    
cufflinks 7.9236 0.0 38.2251   Low
cufflinks 9.77358 0.0 36.0894    
cufflinks 15.2438 0.0 77.7688   High
cufflinks 10.8505 0.0 48.3943    
cufflinks 8.3229 0.0 44.1964    
cufflinks 0.496        
cufflinks 0.507        
cufflinks 0.541        
cufflinks 0.488        
cufflinks 0.634        
cufflinks 0.3       Low
cufflinks 0.823       High
cufflinks 0.319       Low
cufflinks 0.634        
cufflinks 0.791       High
cufflinks 0.67        
cufflinks 0.621        
cufflinks 0.742        
cufflinks 0.858       High
cufflinks 0.62        
cufflinks 0.623        
cufflinks 0.38       Low

0 Strain