Gene : Glyma.11G042200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11715:SF1 - GLYCINE CLEAVAGE SYSTEM H PROTEIN 3, MITOCHONDRIAL Genomic Order:  422
Name:  ? Glyma.11G042200 Secondary Identifier:  ? PAC:30529353
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G042200 0.5kb upstream 0.5kb upstream 2495 true Chr11: 3090092-3092586 Glycine max
Glyma.11G042200 0.5kb upstream 0.5kb upstream 500 false Chr11: 3092087-3092586 Glycine max
Glyma.11G042200 0.5kb downstream 0.5kb downstream 2495 true Chr11: 3089592-3092086 Glycine max
Glyma.11G042200 0.5kb downstream 0.5kb downstream 500 false Chr11: 3089592-3090091 Glycine max
Glyma.11G042200 1.0kb upstream 1.0kb upstream 2995 true Chr11: 3090092-3093086 Glycine max
Glyma.11G042200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3092087-3093086 Glycine max
Glyma.11G042200 1.0kb downstream 1.0kb downstream 2995 true Chr11: 3089092-3092086 Glycine max
Glyma.11G042200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3089092-3090091 Glycine max
Glyma.11G042200 2.0kb upstream 2.0kb upstream 3995 true Chr11: 3090092-3094086 Glycine max
Glyma.11G042200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3092087-3094086 Glycine max
Glyma.11G042200 2.0kb downstream 2.0kb downstream 3995 true Chr11: 3088092-3092086 Glycine max
Glyma.11G042200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3088092-3090091 Glycine max
Glyma.11G042200 5.0kb upstream 5.0kb upstream 6995 true Chr11: 3090092-3097086 Glycine max
Glyma.11G042200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3092087-3097086 Glycine max
Glyma.11G042200 5.0kb downstream 5.0kb downstream 6995 true Chr11: 3085092-3092086 Glycine max
Glyma.11G042200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3085092-3090091 Glycine max
Glyma.11G042200 10.0kb upstream 10.0kb upstream 11995 true Chr11: 3090092-3102086 Glycine max
Glyma.11G042200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3092087-3102086 Glycine max
Glyma.11G042200 10.0kb downstream 10.0kb downstream 11995 true Chr11: 3080092-3092086 Glycine max
Glyma.11G042200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3080092-3090091 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301394 5265 Fabidae View MSA
124065363 5270 Rosid View MSA
123736891 5271 Pentapetalae View MSA
122788661 5272 Eudicot View MSA
122045381 5273 Angiosperm View MSA
121349488 5274 Embryophyte View MSA
123424429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 83.5166 0.0 312.776 High High
cufflinks 30.0877 0.0 99.2244 High High
cufflinks 2.48605 0.0 12.0686    
cufflinks 6.25502 0.0 23.0217    
cufflinks 4.01047 0.0 17.2309    
cufflinks 4.46241 0.0 18.4165    
cufflinks 10.3928 0.0 39.4943    
cufflinks 3.1129 0.0 14.4491    
cufflinks 2.57669 0.0 12.5939    
cufflinks 4.568        
cufflinks 0.274        
cufflinks 1.314        
cufflinks 0.224        
cufflinks 0.09       Low
cufflinks 0.258        
cufflinks 79.285     High High
cufflinks 0.099       Low
cufflinks 2.485        
cufflinks 7.999     High  
cufflinks 81.039     High High
cufflinks 0.214        
cufflinks 70.665     High High
cufflinks 74.835     High High
cufflinks 0.339        
cufflinks 87.895     High High
cufflinks 0.248        

0 Strain