Gene : Glyma.11G041200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13428 - INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN Genomic Order:  412
Name:  ? Glyma.11G041200 Secondary Identifier:  ? PAC:30527900
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G041200 0.5kb upstream 0.5kb upstream 4871 true Chr11: 3000492-3005362 Glycine max
Glyma.11G041200 0.5kb upstream 0.5kb upstream 500 false Chr11: 3000492-3000991 Glycine max
Glyma.11G041200 0.5kb downstream 0.5kb downstream 4871 true Chr11: 3000992-3005862 Glycine max
Glyma.11G041200 0.5kb downstream 0.5kb downstream 500 false Chr11: 3005363-3005862 Glycine max
Glyma.11G041200 1.0kb upstream 1.0kb upstream 5371 true Chr11: 2999992-3005362 Glycine max
Glyma.11G041200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2999992-3000991 Glycine max
Glyma.11G041200 1.0kb downstream 1.0kb downstream 5371 true Chr11: 3000992-3006362 Glycine max
Glyma.11G041200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3005363-3006362 Glycine max
Glyma.11G041200 2.0kb upstream 2.0kb upstream 6371 true Chr11: 2998992-3005362 Glycine max
Glyma.11G041200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2998992-3000991 Glycine max
Glyma.11G041200 2.0kb downstream 2.0kb downstream 6371 true Chr11: 3000992-3007362 Glycine max
Glyma.11G041200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3005363-3007362 Glycine max
Glyma.11G041200 5.0kb upstream 5.0kb upstream 9371 true Chr11: 2995992-3005362 Glycine max
Glyma.11G041200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2995992-3000991 Glycine max
Glyma.11G041200 5.0kb downstream 5.0kb downstream 9371 true Chr11: 3000992-3010362 Glycine max
Glyma.11G041200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3005363-3010362 Glycine max
Glyma.11G041200 10.0kb upstream 10.0kb upstream 14371 true Chr11: 2990992-3005362 Glycine max
Glyma.11G041200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2990992-3000991 Glycine max
Glyma.11G041200 10.0kb downstream 10.0kb downstream 14371 true Chr11: 3000992-3015362 Glycine max
Glyma.11G041200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3005363-3015362 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303508 5265 Fabidae View MSA
124062152 5270 Rosid View MSA
123738040 5271 Pentapetalae View MSA
122785775 5272 Eudicot View MSA
122043959 5273 Angiosperm View MSA
121347546 5274 Embryophyte View MSA
123380568 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10159 0.0 13.3333   Low
cufflinks 2.98927 0.0 14.6973    
cufflinks 3.7915 0.0 17.663    
cufflinks 4.94258 0.0 24.06    
cufflinks 3.57218 0.0 16.7195    
cufflinks 3.17451 0.0 15.2687    
cufflinks 5.34024 0.0 25.4231   High
cufflinks 4.23456 0.0 18.4757    
cufflinks 4.78723 0.0 22.5322    
cufflinks 0.417        
cufflinks 0.532        
cufflinks 0.592        
cufflinks 0.29        
cufflinks 0.36        
cufflinks 1.196       High
cufflinks 0.255        
cufflinks 0.111       Low
cufflinks 0.409        
cufflinks 0.429        
cufflinks 0.231        
cufflinks 1.674       High
cufflinks 0.226        
cufflinks 0.198       Low
cufflinks 0.684        
cufflinks 0.285        
cufflinks 0.875       High

0 Strain