Gene : Glyma.11G024800 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22950:SF269 - EXPRESSED PROTEIN Genomic Order:  248
Name:  ? Glyma.11G024800 Secondary Identifier:  ? PAC:30528343
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G024800 0.5kb upstream 0.5kb upstream 5556 true Chr11: 1753843-1759398 Glycine max
Glyma.11G024800 0.5kb upstream 0.5kb upstream 500 false Chr11: 1753843-1754342 Glycine max
Glyma.11G024800 0.5kb downstream 0.5kb downstream 5556 true Chr11: 1754343-1759898 Glycine max
Glyma.11G024800 0.5kb downstream 0.5kb downstream 500 false Chr11: 1759399-1759898 Glycine max
Glyma.11G024800 1.0kb upstream 1.0kb upstream 6056 true Chr11: 1753343-1759398 Glycine max
Glyma.11G024800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1753343-1754342 Glycine max
Glyma.11G024800 1.0kb downstream 1.0kb downstream 6056 true Chr11: 1754343-1760398 Glycine max
Glyma.11G024800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1759399-1760398 Glycine max
Glyma.11G024800 2.0kb upstream 2.0kb upstream 7056 true Chr11: 1752343-1759398 Glycine max
Glyma.11G024800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1752343-1754342 Glycine max
Glyma.11G024800 2.0kb downstream 2.0kb downstream 7056 true Chr11: 1754343-1761398 Glycine max
Glyma.11G024800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1759399-1761398 Glycine max
Glyma.11G024800 5.0kb upstream 5.0kb upstream 10056 true Chr11: 1749343-1759398 Glycine max
Glyma.11G024800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1749343-1754342 Glycine max
Glyma.11G024800 5.0kb downstream 5.0kb downstream 10056 true Chr11: 1754343-1764398 Glycine max
Glyma.11G024800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1759399-1764398 Glycine max
Glyma.11G024800 10.0kb upstream 10.0kb upstream 15056 true Chr11: 1744343-1759398 Glycine max
Glyma.11G024800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1744343-1754342 Glycine max
Glyma.11G024800 10.0kb downstream 10.0kb downstream 15056 true Chr11: 1754343-1769398 Glycine max
Glyma.11G024800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1759399-1769398 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657072 5273 Angiosperm View MSA
122239013 5265 Fabidae Singleton cluster - no MSA
124038198 5270 Rosid View MSA
123610692 5271 Pentapetalae View MSA
122645289 5272 Eudicot View MSA
120929124 5274 Embryophyte View MSA
122969697 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0347503 0.0 0.185313 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.35829 0.0 3.86236    
cufflinks 0.114434 0.0 0.478239 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.79614 0.0 21.4442   High
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.088       High
cufflinks 0.005     Low  
cufflinks 0.001     Low  
cufflinks 0.002     Low  
cufflinks 0.008     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain