Gene : Glyma.10G264200 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR12072:SF5 - CWF19-LIKE PROTEIN 2 Genomic Order:  2642
Name:  ? Glyma.10G264200 Secondary Identifier:  ? PAC:30474561

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G264200 0.5kb upstream 0.5kb upstream 6265 true Chr10: 48851808-48858072 Glycine max
Glyma.10G264200 0.5kb upstream 0.5kb upstream 500 false Chr10: 48851808-48852307 Glycine max
Glyma.10G264200 0.5kb downstream 0.5kb downstream 6265 true Chr10: 48852308-48858572 Glycine max
Glyma.10G264200 0.5kb downstream 0.5kb downstream 500 false Chr10: 48858073-48858572 Glycine max
Glyma.10G264200 1.0kb upstream 1.0kb upstream 6765 true Chr10: 48851308-48858072 Glycine max
Glyma.10G264200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48851308-48852307 Glycine max
Glyma.10G264200 1.0kb downstream 1.0kb downstream 6765 true Chr10: 48852308-48859072 Glycine max
Glyma.10G264200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48858073-48859072 Glycine max
Glyma.10G264200 2.0kb upstream 2.0kb upstream 7765 true Chr10: 48850308-48858072 Glycine max
Glyma.10G264200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48850308-48852307 Glycine max
Glyma.10G264200 2.0kb downstream 2.0kb downstream 7765 true Chr10: 48852308-48860072 Glycine max
Glyma.10G264200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48858073-48860072 Glycine max
Glyma.10G264200 5.0kb upstream 5.0kb upstream 10765 true Chr10: 48847308-48858072 Glycine max
Glyma.10G264200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48847308-48852307 Glycine max
Glyma.10G264200 5.0kb downstream 5.0kb downstream 10765 true Chr10: 48852308-48863072 Glycine max
Glyma.10G264200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48858073-48863072 Glycine max
Glyma.10G264200 10.0kb upstream 10.0kb upstream 15765 true Chr10: 48842308-48858072 Glycine max
Glyma.10G264200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48842308-48852307 Glycine max
Glyma.10G264200 10.0kb downstream 10.0kb downstream 15765 true Chr10: 48852308-48868072 Glycine max
Glyma.10G264200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48858073-48868072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306045 5265 Fabidae View MSA
124063032 5270 Rosid View MSA
123740885 5271 Pentapetalae View MSA
122786824 5272 Eudicot View MSA
122046220 5273 Angiosperm View MSA
121347748 5274 Embryophyte View MSA
123426181 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.14821 0.0 19.1217   High
cufflinks 4.47527 0.0 12.2383   Low
cufflinks 8.14823 0.0 21.7424   High
cufflinks 5.26499 0.0 14.2349    
cufflinks 4.668 0.0 12.7354    
cufflinks 5.32048 0.0 14.4029    
cufflinks 6.13524 0.0 16.4991    
cufflinks 4.32409 0.0 11.84   Low
cufflinks 6.51448 0.0 17.4762    
cufflinks 2.92       Low
cufflinks 5.936     High  
cufflinks 6.595        
cufflinks 4.188        
cufflinks 4.113        
cufflinks 6.239     High  
cufflinks 5.482        
cufflinks 3.028       Low
cufflinks 5.707        
cufflinks 4.06        
cufflinks 6.388        
cufflinks 6.039     High  
cufflinks 5.946        
cufflinks 4.21        
cufflinks 7.159     High High
cufflinks 5.787        
cufflinks 5.279        

0 Strain