Gene : Glyma.10G272800 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Genomic Order:  2728
Name:  ? Glyma.10G272800 Secondary Identifier:  ? PAC:30475449
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G272800 0.5kb upstream 0.5kb upstream 8867 true Chr10: 49530356-49539222 Glycine max
Glyma.10G272800 0.5kb upstream 0.5kb upstream 500 false Chr10: 49530356-49530855 Glycine max
Glyma.10G272800 0.5kb downstream 0.5kb downstream 8867 true Chr10: 49530856-49539722 Glycine max
Glyma.10G272800 0.5kb downstream 0.5kb downstream 500 false Chr10: 49539223-49539722 Glycine max
Glyma.10G272800 1.0kb upstream 1.0kb upstream 9367 true Chr10: 49529856-49539222 Glycine max
Glyma.10G272800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 49529856-49530855 Glycine max
Glyma.10G272800 1.0kb downstream 1.0kb downstream 9367 true Chr10: 49530856-49540222 Glycine max
Glyma.10G272800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 49539223-49540222 Glycine max
Glyma.10G272800 2.0kb upstream 2.0kb upstream 10367 true Chr10: 49528856-49539222 Glycine max
Glyma.10G272800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 49528856-49530855 Glycine max
Glyma.10G272800 2.0kb downstream 2.0kb downstream 10367 true Chr10: 49530856-49541222 Glycine max
Glyma.10G272800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 49539223-49541222 Glycine max
Glyma.10G272800 5.0kb upstream 5.0kb upstream 13367 true Chr10: 49525856-49539222 Glycine max
Glyma.10G272800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 49525856-49530855 Glycine max
Glyma.10G272800 5.0kb downstream 5.0kb downstream 13367 true Chr10: 49530856-49544222 Glycine max
Glyma.10G272800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 49539223-49544222 Glycine max
Glyma.10G272800 10.0kb upstream 10.0kb upstream 18367 true Chr10: 49520856-49539222 Glycine max
Glyma.10G272800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 49520856-49530855 Glycine max
Glyma.10G272800 10.0kb downstream 10.0kb downstream 18367 true Chr10: 49530856-49549222 Glycine max
Glyma.10G272800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 49539223-49549222 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308481 5265 Fabidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9187 0.0 81.0876    
cufflinks 14.1831 0.0 49.3232   Low
cufflinks 18.6553 0.0 68.5781    
cufflinks 17.3488 0.0 62.8172    
cufflinks 18.9278 0.0 68.6028    
cufflinks 14.552 0.0 50.8029   Low
cufflinks 26.5673 0.0 103.137 High High
cufflinks 13.9241 0.0 48.7251   Low
cufflinks 23.3744 0.0 89.4322 High High
cufflinks 2.261       Low
cufflinks 4.223        
cufflinks 3.982        
cufflinks 4.052        
cufflinks 4.618        
cufflinks 6.892     High High
cufflinks 3.099        
cufflinks 3.1        
cufflinks 4.307        
cufflinks 3.511        
cufflinks 3.221        
cufflinks 4.569        
cufflinks 3.345        
cufflinks 3.119        
cufflinks 3.141        
cufflinks 3.228        
cufflinks 3.946        

0 Strain