Gene : Glyma.10G228600 G. max Wm82.a2.v1
Defline:  (1 of 117) PF00560//PF08263//PF13855 - Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  2286
Name:  ? Glyma.10G228600 Secondary Identifier:  ? PAC:30475095
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G228600 0.5kb upstream 0.5kb upstream 3744 true Chr10: 45880033-45883776 Glycine max
Glyma.10G228600 0.5kb upstream 0.5kb upstream 500 false Chr10: 45880033-45880532 Glycine max
Glyma.10G228600 0.5kb downstream 0.5kb downstream 3744 true Chr10: 45880533-45884276 Glycine max
Glyma.10G228600 0.5kb downstream 0.5kb downstream 500 false Chr10: 45883777-45884276 Glycine max
Glyma.10G228600 1.0kb upstream 1.0kb upstream 4244 true Chr10: 45879533-45883776 Glycine max
Glyma.10G228600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 45879533-45880532 Glycine max
Glyma.10G228600 1.0kb downstream 1.0kb downstream 4244 true Chr10: 45880533-45884776 Glycine max
Glyma.10G228600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 45883777-45884776 Glycine max
Glyma.10G228600 2.0kb upstream 2.0kb upstream 5244 true Chr10: 45878533-45883776 Glycine max
Glyma.10G228600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 45878533-45880532 Glycine max
Glyma.10G228600 2.0kb downstream 2.0kb downstream 5244 true Chr10: 45880533-45885776 Glycine max
Glyma.10G228600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 45883777-45885776 Glycine max
Glyma.10G228600 5.0kb upstream 5.0kb upstream 8244 true Chr10: 45875533-45883776 Glycine max
Glyma.10G228600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 45875533-45880532 Glycine max
Glyma.10G228600 5.0kb downstream 5.0kb downstream 8244 true Chr10: 45880533-45888776 Glycine max
Glyma.10G228600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 45883777-45888776 Glycine max
Glyma.10G228600 10.0kb upstream 10.0kb upstream 13244 true Chr10: 45870533-45883776 Glycine max
Glyma.10G228600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 45870533-45880532 Glycine max
Glyma.10G228600 10.0kb downstream 10.0kb downstream 13244 true Chr10: 45880533-45893776 Glycine max
Glyma.10G228600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 45883777-45893776 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315107 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.383007 0.0 1.40705    
cufflinks 0.183775 0.0 0.698271 Low  
cufflinks 0.434343 0.0 1.57935    
cufflinks 0.234704 0.0 0.88227    
cufflinks 0.00208463 0.0 0.0110044 Low Low
cufflinks 0.0557876 0.0 0.222352 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.222543 0.0 0.838247 Low  
cufflinks 0.00835953 0.0 0.0377409 Low Low
cufflinks 0.127        
cufflinks 0.042     Low  
cufflinks 0.081     Low  
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.233        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.11     Low  
cufflinks 0.216        
cufflinks 0.242        
cufflinks 0.036     Low  
cufflinks 0.252        
cufflinks 0.271       High
cufflinks 0.053     Low  
cufflinks 0.162        
cufflinks 0.071        

0 Strain