Gene : Glyma.10G204400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31140:SF3 - AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATED Genomic Order:  2044
Name:  ? Glyma.10G204400 Secondary Identifier:  ? PAC:30475598
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G204400 0.5kb upstream 0.5kb upstream 2351 true Chr10: 43557479-43559829 Glycine max
Glyma.10G204400 0.5kb upstream 0.5kb upstream 500 false Chr10: 43559330-43559829 Glycine max
Glyma.10G204400 0.5kb downstream 0.5kb downstream 2351 true Chr10: 43556979-43559329 Glycine max
Glyma.10G204400 0.5kb downstream 0.5kb downstream 500 false Chr10: 43556979-43557478 Glycine max
Glyma.10G204400 1.0kb upstream 1.0kb upstream 2851 true Chr10: 43557479-43560329 Glycine max
Glyma.10G204400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43559330-43560329 Glycine max
Glyma.10G204400 1.0kb downstream 1.0kb downstream 2851 true Chr10: 43556479-43559329 Glycine max
Glyma.10G204400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43556479-43557478 Glycine max
Glyma.10G204400 2.0kb upstream 2.0kb upstream 3851 true Chr10: 43557479-43561329 Glycine max
Glyma.10G204400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43559330-43561329 Glycine max
Glyma.10G204400 2.0kb downstream 2.0kb downstream 3851 true Chr10: 43555479-43559329 Glycine max
Glyma.10G204400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43555479-43557478 Glycine max
Glyma.10G204400 5.0kb upstream 5.0kb upstream 6851 true Chr10: 43557479-43564329 Glycine max
Glyma.10G204400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43559330-43564329 Glycine max
Glyma.10G204400 5.0kb downstream 5.0kb downstream 6851 true Chr10: 43552479-43559329 Glycine max
Glyma.10G204400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43552479-43557478 Glycine max
Glyma.10G204400 10.0kb upstream 10.0kb upstream 11851 true Chr10: 43557479-43569329 Glycine max
Glyma.10G204400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43559330-43569329 Glycine max
Glyma.10G204400 10.0kb downstream 10.0kb downstream 11851 true Chr10: 43547479-43559329 Glycine max
Glyma.10G204400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43547479-43557478 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296604 5265 Fabidae View MSA
124042753 5270 Rosid View MSA
123612922 5271 Pentapetalae View MSA
122647401 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0681 0.0 37.6479   High
cufflinks 2.89597 0.0 9.08334    
cufflinks 4.40311 0.0 13.143    
cufflinks 0.437725 0.0 1.63158    
cufflinks 2.3667 0.0 7.54533    
cufflinks 2.6965 0.0 8.49318    
cufflinks 0.095479 0.0 0.378441 Low Low
cufflinks 1.59791 0.0 5.42483    
cufflinks 1.65932 0.0 5.58346    
cufflinks 6.422        
cufflinks 18.538     High  
cufflinks 4.022        
cufflinks 1.7       Low
cufflinks 0.525       Low
cufflinks 11.174     High  
cufflinks 20.871     High  
cufflinks 48.458     High High
cufflinks 0.977       Low
cufflinks 2.894        
cufflinks 23.226     High  
cufflinks 26.487     High  
cufflinks 15.515     High  
cufflinks 9.444     High  
cufflinks 10.963     High  
cufflinks 13.208     High  
cufflinks 35.776     High High

0 Strain