Gene : Glyma.10G093600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12565:SF112 - TRANSCRIPTION FACTOR BHLH48-RELATED Genomic Order:  936
Name:  ? Glyma.10G093600 Secondary Identifier:  ? PAC:30476644
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G093600 0.5kb upstream 0.5kb upstream 7724 true Chr10: 13352173-13359896 Glycine max
Glyma.10G093600 0.5kb upstream 0.5kb upstream 500 false Chr10: 13352173-13352672 Glycine max
Glyma.10G093600 0.5kb downstream 0.5kb downstream 7724 true Chr10: 13352673-13360396 Glycine max
Glyma.10G093600 0.5kb downstream 0.5kb downstream 500 false Chr10: 13359897-13360396 Glycine max
Glyma.10G093600 1.0kb upstream 1.0kb upstream 8224 true Chr10: 13351673-13359896 Glycine max
Glyma.10G093600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13351673-13352672 Glycine max
Glyma.10G093600 1.0kb downstream 1.0kb downstream 8224 true Chr10: 13352673-13360896 Glycine max
Glyma.10G093600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13359897-13360896 Glycine max
Glyma.10G093600 2.0kb upstream 2.0kb upstream 9224 true Chr10: 13350673-13359896 Glycine max
Glyma.10G093600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13350673-13352672 Glycine max
Glyma.10G093600 2.0kb downstream 2.0kb downstream 9224 true Chr10: 13352673-13361896 Glycine max
Glyma.10G093600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13359897-13361896 Glycine max
Glyma.10G093600 5.0kb upstream 5.0kb upstream 12224 true Chr10: 13347673-13359896 Glycine max
Glyma.10G093600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13347673-13352672 Glycine max
Glyma.10G093600 5.0kb downstream 5.0kb downstream 12224 true Chr10: 13352673-13364896 Glycine max
Glyma.10G093600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13359897-13364896 Glycine max
Glyma.10G093600 10.0kb upstream 10.0kb upstream 17224 true Chr10: 13342673-13359896 Glycine max
Glyma.10G093600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13342673-13352672 Glycine max
Glyma.10G093600 10.0kb downstream 10.0kb downstream 17224 true Chr10: 13352673-13369896 Glycine max
Glyma.10G093600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13359897-13369896 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296564 5265 Fabidae View MSA
124063738 5270 Rosid View MSA
123737117 5271 Pentapetalae View MSA
122769887 5272 Eudicot View MSA
122044005 5273 Angiosperm View MSA
121310224 5274 Embryophyte View MSA
123347772 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3797 0.0 32.7936   High
cufflinks 11.8796 0.0 41.2779   High
cufflinks 7.15848 0.0 26.4233    
cufflinks 4.413 0.0 15.7159    
cufflinks 2.91124 0.0 8.78863    
cufflinks 2.85495 0.0 11.5071    
cufflinks 4.15028 0.0 14.7137    
cufflinks 2.65355 0.0 10.9747    
cufflinks 1.47648 0.0 7.33808   Low
cufflinks 0.766        
cufflinks 0.086       Low
cufflinks 1.559        
cufflinks 0.197        
cufflinks 0.173        
cufflinks 0.261        
cufflinks 3.31       High
cufflinks 0.054     Low Low
cufflinks 4.682       High
cufflinks 1.362        
cufflinks 4.281       High
cufflinks 0.074       Low
cufflinks 3.392       High
cufflinks 1.883        
cufflinks 0.103       Low
cufflinks 3.179       High
cufflinks 0.119        

0 Strain