Gene : Glyma.10G099200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11977:SF46 - VILLIN-2-RELATED Genomic Order:  992
Name:  ? Glyma.10G099200 Secondary Identifier:  ? PAC:30477290
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G099200 0.5kb upstream 0.5kb upstream 14621 true Chr10: 17435079-17449699 Glycine max
Glyma.10G099200 0.5kb upstream 0.5kb upstream 500 false Chr10: 17435079-17435578 Glycine max
Glyma.10G099200 0.5kb downstream 0.5kb downstream 14621 true Chr10: 17435579-17450199 Glycine max
Glyma.10G099200 0.5kb downstream 0.5kb downstream 500 false Chr10: 17449700-17450199 Glycine max
Glyma.10G099200 1.0kb upstream 1.0kb upstream 15121 true Chr10: 17434579-17449699 Glycine max
Glyma.10G099200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 17434579-17435578 Glycine max
Glyma.10G099200 1.0kb downstream 1.0kb downstream 15121 true Chr10: 17435579-17450699 Glycine max
Glyma.10G099200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 17449700-17450699 Glycine max
Glyma.10G099200 2.0kb upstream 2.0kb upstream 16121 true Chr10: 17433579-17449699 Glycine max
Glyma.10G099200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 17433579-17435578 Glycine max
Glyma.10G099200 2.0kb downstream 2.0kb downstream 16121 true Chr10: 17435579-17451699 Glycine max
Glyma.10G099200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 17449700-17451699 Glycine max
Glyma.10G099200 5.0kb upstream 5.0kb upstream 19121 true Chr10: 17430579-17449699 Glycine max
Glyma.10G099200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 17430579-17435578 Glycine max
Glyma.10G099200 5.0kb downstream 5.0kb downstream 19121 true Chr10: 17435579-17454699 Glycine max
Glyma.10G099200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 17449700-17454699 Glycine max
Glyma.10G099200 10.0kb upstream 10.0kb upstream 24121 true Chr10: 17425579-17449699 Glycine max
Glyma.10G099200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 17425579-17435578 Glycine max
Glyma.10G099200 10.0kb downstream 10.0kb downstream 24121 true Chr10: 17435579-17459699 Glycine max
Glyma.10G099200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 17449700-17459699 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311530 5265 Fabidae View MSA
124073983 5270 Rosid View MSA
123746997 5271 Pentapetalae View MSA
122787653 5272 Eudicot View MSA
122045206 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.1748 0.0 51.2954   Low
cufflinks 14.6227 0.0 57.9795    
cufflinks 27.6573 0.0 116.077 High  
cufflinks 21.8521 0.0 95.428 High  
cufflinks 19.5757 0.0 82.3286    
cufflinks 31.1007 0.0 134.414 High High
cufflinks 13.8268 0.0 54.0659   Low
cufflinks 32.4942 0.0 143.509 High High
cufflinks 18.2451 0.0 75.5932    
cufflinks 3.339       High
cufflinks 2.457        
cufflinks 2.474        
cufflinks 2.852        
cufflinks 2.71        
cufflinks 2.021        
cufflinks 1.459       Low
cufflinks 2.566        
cufflinks 2.367        
cufflinks 1.994        
cufflinks 1.361       Low
cufflinks 2.466        
cufflinks 1.498       Low
cufflinks 1.372       Low
cufflinks 2.452        
cufflinks 1.437       Low
cufflinks 3.656       High

0 Strain