Gene : Glyma.10G061800 G. max Wm82.a2.v1
Defline:  (1 of 61) PF00314 - Thaumatin family (Thaumatin) Genomic Order:  618
Name:  ? Glyma.10G061800 Secondary Identifier:  ? PAC:30478142
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G061800 0.5kb upstream 0.5kb upstream 2503 true Chr10: 5789579-5792081 Glycine max
Glyma.10G061800 0.5kb upstream 0.5kb upstream 500 false Chr10: 5791582-5792081 Glycine max
Glyma.10G061800 0.5kb downstream 0.5kb downstream 2503 true Chr10: 5789079-5791581 Glycine max
Glyma.10G061800 0.5kb downstream 0.5kb downstream 500 false Chr10: 5789079-5789578 Glycine max
Glyma.10G061800 1.0kb upstream 1.0kb upstream 3003 true Chr10: 5789579-5792581 Glycine max
Glyma.10G061800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5791582-5792581 Glycine max
Glyma.10G061800 1.0kb downstream 1.0kb downstream 3003 true Chr10: 5788579-5791581 Glycine max
Glyma.10G061800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5788579-5789578 Glycine max
Glyma.10G061800 2.0kb upstream 2.0kb upstream 4003 true Chr10: 5789579-5793581 Glycine max
Glyma.10G061800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5791582-5793581 Glycine max
Glyma.10G061800 2.0kb downstream 2.0kb downstream 4003 true Chr10: 5787579-5791581 Glycine max
Glyma.10G061800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5787579-5789578 Glycine max
Glyma.10G061800 5.0kb upstream 5.0kb upstream 7003 true Chr10: 5789579-5796581 Glycine max
Glyma.10G061800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5791582-5796581 Glycine max
Glyma.10G061800 5.0kb downstream 5.0kb downstream 7003 true Chr10: 5784579-5791581 Glycine max
Glyma.10G061800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5784579-5789578 Glycine max
Glyma.10G061800 10.0kb upstream 10.0kb upstream 12003 true Chr10: 5789579-5801581 Glycine max
Glyma.10G061800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5791582-5801581 Glycine max
Glyma.10G061800 10.0kb downstream 10.0kb downstream 12003 true Chr10: 5779579-5791581 Glycine max
Glyma.10G061800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5779579-5789578 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314873 5265 Fabidae View MSA
124073394 5270 Rosid View MSA
123751060 5271 Pentapetalae View MSA
122794838 5272 Eudicot View MSA
122050301 5273 Angiosperm View MSA
121349600 5274 Embryophyte View MSA
123428823 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.05785 0.0 18.0177    
cufflinks 6.61923 0.0 19.5106    
cufflinks 3.05238 0.0 10.0499    
cufflinks 1.13608 0.0 4.10145    
cufflinks 0.111578 0.0 0.445972 Low Low
cufflinks 54.9703 0.0 150.814 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.08252 0.0 3.91489    
cufflinks 0.055363 0.0 0.228854 Low Low
cufflinks 2.394        
cufflinks 0.462        
cufflinks 1.28        
cufflinks 0.039     Low Low
cufflinks 0.048     Low Low
cufflinks 0.009     Low Low
cufflinks 1.445        
cufflinks 0.022     Low Low
cufflinks 1.68        
cufflinks 1.631        
cufflinks 0.553        
cufflinks 0.21        
cufflinks 1.386        
cufflinks 5.088       High
cufflinks 1.677        
cufflinks 1.277        
cufflinks 0.88        

0 Strain