Gene : Glyma.10G068100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR15052:SF2 - GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 2 Genomic Order:  681
Name:  ? Glyma.10G068100 Secondary Identifier:  ? PAC:30476581
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G068100 0.5kb upstream 0.5kb upstream 16968 true Chr10: 6714929-6731896 Glycine max
Glyma.10G068100 0.5kb upstream 0.5kb upstream 500 false Chr10: 6731397-6731896 Glycine max
Glyma.10G068100 0.5kb downstream 0.5kb downstream 16968 true Chr10: 6714429-6731396 Glycine max
Glyma.10G068100 0.5kb downstream 0.5kb downstream 500 false Chr10: 6714429-6714928 Glycine max
Glyma.10G068100 1.0kb upstream 1.0kb upstream 17468 true Chr10: 6714929-6732396 Glycine max
Glyma.10G068100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6731397-6732396 Glycine max
Glyma.10G068100 1.0kb downstream 1.0kb downstream 17468 true Chr10: 6713929-6731396 Glycine max
Glyma.10G068100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6713929-6714928 Glycine max
Glyma.10G068100 2.0kb upstream 2.0kb upstream 18468 true Chr10: 6714929-6733396 Glycine max
Glyma.10G068100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6731397-6733396 Glycine max
Glyma.10G068100 2.0kb downstream 2.0kb downstream 18468 true Chr10: 6712929-6731396 Glycine max
Glyma.10G068100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6712929-6714928 Glycine max
Glyma.10G068100 5.0kb upstream 5.0kb upstream 21468 true Chr10: 6714929-6736396 Glycine max
Glyma.10G068100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6731397-6736396 Glycine max
Glyma.10G068100 5.0kb downstream 5.0kb downstream 21468 true Chr10: 6709929-6731396 Glycine max
Glyma.10G068100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6709929-6714928 Glycine max
Glyma.10G068100 10.0kb upstream 10.0kb upstream 26468 true Chr10: 6714929-6741396 Glycine max
Glyma.10G068100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6731397-6741396 Glycine max
Glyma.10G068100 10.0kb downstream 10.0kb downstream 26468 true Chr10: 6704929-6731396 Glycine max
Glyma.10G068100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6704929-6714928 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026858 5273 Angiosperm View MSA
122310918 5265 Fabidae View MSA
124063805 5270 Rosid View MSA
123737128 5271 Pentapetalae View MSA
122794531 5272 Eudicot View MSA
121347438 5274 Embryophyte View MSA
123380552 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.22184 0.0 7.87736    
cufflinks 2.49704 0.0 9.99463   High
cufflinks 2.27195 0.0 7.96819    
cufflinks 1.78102 0.0 6.70001    
cufflinks 1.47894 0.0 4.54874    
cufflinks 1.36495 0.0 4.26    
cufflinks 0.92306 0.0 4.40717   Low
cufflinks 1.90293 0.0 7.05072    
cufflinks 1.74509 0.0 6.58698    
cufflinks 0.214       Low
cufflinks 0.346        
cufflinks 0.317        
cufflinks 0.182       Low
cufflinks 0.173       Low
cufflinks 0.311        
cufflinks 0.437       High
cufflinks 0.167       Low
cufflinks 0.288        
cufflinks 0.39        
cufflinks 0.409        
cufflinks 0.375        
cufflinks 0.425        
cufflinks 0.419        
cufflinks 0.331        
cufflinks 0.405        
cufflinks 0.302        

0 Strain