Gene : Glyma.10G020800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32370:SF30 - BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 Genomic Order:  208
Name:  ? Glyma.10G020800 Secondary Identifier:  ? PAC:30476782
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G020800 0.5kb upstream 0.5kb upstream 5604 true Chr10: 1799252-1804855 Glycine max
Glyma.10G020800 0.5kb upstream 0.5kb upstream 500 false Chr10: 1799252-1799751 Glycine max
Glyma.10G020800 0.5kb downstream 0.5kb downstream 5604 true Chr10: 1799752-1805355 Glycine max
Glyma.10G020800 0.5kb downstream 0.5kb downstream 500 false Chr10: 1804856-1805355 Glycine max
Glyma.10G020800 1.0kb upstream 1.0kb upstream 6104 true Chr10: 1798752-1804855 Glycine max
Glyma.10G020800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1798752-1799751 Glycine max
Glyma.10G020800 1.0kb downstream 1.0kb downstream 6104 true Chr10: 1799752-1805855 Glycine max
Glyma.10G020800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1804856-1805855 Glycine max
Glyma.10G020800 2.0kb upstream 2.0kb upstream 7104 true Chr10: 1797752-1804855 Glycine max
Glyma.10G020800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1797752-1799751 Glycine max
Glyma.10G020800 2.0kb downstream 2.0kb downstream 7104 true Chr10: 1799752-1806855 Glycine max
Glyma.10G020800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1804856-1806855 Glycine max
Glyma.10G020800 5.0kb upstream 5.0kb upstream 10104 true Chr10: 1794752-1804855 Glycine max
Glyma.10G020800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1794752-1799751 Glycine max
Glyma.10G020800 5.0kb downstream 5.0kb downstream 10104 true Chr10: 1799752-1809855 Glycine max
Glyma.10G020800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1804856-1809855 Glycine max
Glyma.10G020800 10.0kb upstream 10.0kb upstream 15104 true Chr10: 1789752-1804855 Glycine max
Glyma.10G020800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1789752-1799751 Glycine max
Glyma.10G020800 10.0kb downstream 10.0kb downstream 15104 true Chr10: 1799752-1814855 Glycine max
Glyma.10G020800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1804856-1814855 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122242123 5265 Fabidae Singleton cluster - no MSA
123986868 5270 Rosid Singleton cluster - no MSA
123742261 5271 Pentapetalae View MSA
122789969 5272 Eudicot View MSA
122042362 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.03618 0.0 8.49489    
cufflinks 1.03056 0.0 5.30835    
cufflinks 5.28369 0.0 20.3551    
cufflinks 10.6862 0.0 37.2553   High
cufflinks 2.87295 0.0 10.9338    
cufflinks 1.31967 0.0 6.32742    
cufflinks 0.424265 0.0 1.93477   Low
cufflinks 11.8449 0.0 40.6072   High
cufflinks 3.80822 0.0 15.3279    
cufflinks 0.931       High
cufflinks 0.107       Low
cufflinks 0.97       High
cufflinks 0.718        
cufflinks 0.347        
cufflinks 0.029     Low Low
cufflinks 0.501        
cufflinks 0.233        
cufflinks 0.843       High
cufflinks 0.133        
cufflinks 0.241        
cufflinks 0.177        
cufflinks 0.335        
cufflinks 0.439        
cufflinks 0.085       Low
cufflinks 0.457        
cufflinks 0.206        

0 Strain