Gene : Glyma.09G273600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24351//PTHR24351:SF80 - RIBOSOMAL PROTEIN S6 KINASE Genomic Order:  2736
Name:  ? Glyma.09G273600 Secondary Identifier:  ? PAC:30486086
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G273600 0.5kb upstream 0.5kb upstream 4336 true Chr09: 48976167-48980502 Glycine max
Glyma.09G273600 0.5kb upstream 0.5kb upstream 500 false Chr09: 48980003-48980502 Glycine max
Glyma.09G273600 0.5kb downstream 0.5kb downstream 4336 true Chr09: 48975667-48980002 Glycine max
Glyma.09G273600 0.5kb downstream 0.5kb downstream 500 false Chr09: 48975667-48976166 Glycine max
Glyma.09G273600 1.0kb upstream 1.0kb upstream 4836 true Chr09: 48976167-48981002 Glycine max
Glyma.09G273600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48980003-48981002 Glycine max
Glyma.09G273600 1.0kb downstream 1.0kb downstream 4836 true Chr09: 48975167-48980002 Glycine max
Glyma.09G273600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48975167-48976166 Glycine max
Glyma.09G273600 2.0kb upstream 2.0kb upstream 5836 true Chr09: 48976167-48982002 Glycine max
Glyma.09G273600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48980003-48982002 Glycine max
Glyma.09G273600 2.0kb downstream 2.0kb downstream 5836 true Chr09: 48974167-48980002 Glycine max
Glyma.09G273600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48974167-48976166 Glycine max
Glyma.09G273600 5.0kb upstream 5.0kb upstream 8836 true Chr09: 48976167-48985002 Glycine max
Glyma.09G273600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48980003-48985002 Glycine max
Glyma.09G273600 5.0kb downstream 5.0kb downstream 8836 true Chr09: 48971167-48980002 Glycine max
Glyma.09G273600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48971167-48976166 Glycine max
Glyma.09G273600 10.0kb upstream 10.0kb upstream 13836 true Chr09: 48976167-48990002 Glycine max
Glyma.09G273600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48980003-48990002 Glycine max
Glyma.09G273600 10.0kb downstream 10.0kb downstream 13836 true Chr09: 48966167-48980002 Glycine max
Glyma.09G273600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48966167-48976166 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300581 5265 Fabidae View MSA
124070786 5270 Rosid View MSA
123752470 5271 Pentapetalae View MSA
122795934 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.936 0.0 45.4189    
cufflinks 6.76635 0.0 27.8321   Low
cufflinks 22.0774 0.0 99.1188 High High
cufflinks 16.7727 0.0 69.1396    
cufflinks 15.0397 0.0 62.9866    
cufflinks 23.4002 0.0 108.011 High High
cufflinks 16.4581 0.0 62.3325    
cufflinks 10.8597 0.0 41.4692    
cufflinks 10.956 0.0 38.0694    
cufflinks 1.539       Low
cufflinks 3.892       High
cufflinks 4.322       High
cufflinks 3.401        
cufflinks 3.877       High
cufflinks 2.095        
cufflinks 1.435       Low
cufflinks 2.446        
cufflinks 2.756        
cufflinks 1.835        
cufflinks 1.77        
cufflinks 2.425        
cufflinks 1.424       Low
cufflinks 1.502       Low
cufflinks 3.701       High
cufflinks 1.66        
cufflinks 2.386        

0 Strain