Gene : Glyma.09G241600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23070:SF5 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  2416
Name:  ? Glyma.09G241600 Secondary Identifier:  ? PAC:30486688
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G241600 0.5kb upstream 0.5kb upstream 2003 true Chr09: 46383019-46385021 Glycine max
Glyma.09G241600 0.5kb upstream 0.5kb upstream 500 false Chr09: 46384522-46385021 Glycine max
Glyma.09G241600 0.5kb downstream 0.5kb downstream 2003 true Chr09: 46382519-46384521 Glycine max
Glyma.09G241600 0.5kb downstream 0.5kb downstream 500 false Chr09: 46382519-46383018 Glycine max
Glyma.09G241600 1.0kb upstream 1.0kb upstream 2503 true Chr09: 46383019-46385521 Glycine max
Glyma.09G241600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46384522-46385521 Glycine max
Glyma.09G241600 1.0kb downstream 1.0kb downstream 2503 true Chr09: 46382019-46384521 Glycine max
Glyma.09G241600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46382019-46383018 Glycine max
Glyma.09G241600 2.0kb upstream 2.0kb upstream 3503 true Chr09: 46383019-46386521 Glycine max
Glyma.09G241600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46384522-46386521 Glycine max
Glyma.09G241600 2.0kb downstream 2.0kb downstream 3503 true Chr09: 46381019-46384521 Glycine max
Glyma.09G241600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46381019-46383018 Glycine max
Glyma.09G241600 5.0kb upstream 5.0kb upstream 6503 true Chr09: 46383019-46389521 Glycine max
Glyma.09G241600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46384522-46389521 Glycine max
Glyma.09G241600 5.0kb downstream 5.0kb downstream 6503 true Chr09: 46378019-46384521 Glycine max
Glyma.09G241600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46378019-46383018 Glycine max
Glyma.09G241600 10.0kb upstream 10.0kb upstream 11503 true Chr09: 46383019-46394521 Glycine max
Glyma.09G241600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46384522-46394521 Glycine max
Glyma.09G241600 10.0kb downstream 10.0kb downstream 11503 true Chr09: 46373019-46384521 Glycine max
Glyma.09G241600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46373019-46383018 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296486 5265 Fabidae View MSA
124051732 5270 Rosid View MSA
123620275 5271 Pentapetalae View MSA
122654686 5272 Eudicot View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.530914 0.0 1.9646    
cufflinks 0.722413 0.0 2.62685    
cufflinks 0.565761 0.0 2.08277    
cufflinks 0.656882 0.0 2.39983    
cufflinks 0.145706 0.0 0.570569 Low  
cufflinks 0.025009 0.0 0.107176 Low Low
cufflinks 0.0479238 0.0 0.196232 Low Low
cufflinks 6.02893 0.0 17.1799   High
cufflinks 0.578372 0.0 2.12956    
cufflinks 0.612        
cufflinks 0.051     Low Low
cufflinks 1.558       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.259        
cufflinks 1.198        
cufflinks 0.135        
cufflinks 1.726       High
cufflinks 0.922        
cufflinks 0.84        
cufflinks 0.249        
cufflinks 0.432        
cufflinks 0.101     Low Low
cufflinks 0.195        
cufflinks 1.302       High
cufflinks 0.032     Low Low

0 Strain