Gene : Glyma.09G228100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21736:SF23 - PROTEIN OBERON 4 Genomic Order:  2281
Name:  ? Glyma.09G228100 Secondary Identifier:  ? PAC:30487011
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G228100 0.5kb upstream 0.5kb upstream 6752 true Chr09: 45238428-45245179 Glycine max
Glyma.09G228100 0.5kb upstream 0.5kb upstream 500 false Chr09: 45244680-45245179 Glycine max
Glyma.09G228100 0.5kb downstream 0.5kb downstream 6752 true Chr09: 45237928-45244679 Glycine max
Glyma.09G228100 0.5kb downstream 0.5kb downstream 500 false Chr09: 45237928-45238427 Glycine max
Glyma.09G228100 1.0kb upstream 1.0kb upstream 7252 true Chr09: 45238428-45245679 Glycine max
Glyma.09G228100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45244680-45245679 Glycine max
Glyma.09G228100 1.0kb downstream 1.0kb downstream 7252 true Chr09: 45237428-45244679 Glycine max
Glyma.09G228100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45237428-45238427 Glycine max
Glyma.09G228100 2.0kb upstream 2.0kb upstream 8252 true Chr09: 45238428-45246679 Glycine max
Glyma.09G228100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45244680-45246679 Glycine max
Glyma.09G228100 2.0kb downstream 2.0kb downstream 8252 true Chr09: 45236428-45244679 Glycine max
Glyma.09G228100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45236428-45238427 Glycine max
Glyma.09G228100 5.0kb upstream 5.0kb upstream 11252 true Chr09: 45238428-45249679 Glycine max
Glyma.09G228100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45244680-45249679 Glycine max
Glyma.09G228100 5.0kb downstream 5.0kb downstream 11252 true Chr09: 45233428-45244679 Glycine max
Glyma.09G228100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45233428-45238427 Glycine max
Glyma.09G228100 10.0kb upstream 10.0kb upstream 16252 true Chr09: 45238428-45254679 Glycine max
Glyma.09G228100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45244680-45254679 Glycine max
Glyma.09G228100 10.0kb downstream 10.0kb downstream 16252 true Chr09: 45228428-45244679 Glycine max
Glyma.09G228100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45228428-45238427 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304566 5265 Fabidae View MSA
124068909 5270 Rosid View MSA
123740633 5271 Pentapetalae View MSA
122788431 5272 Eudicot View MSA
122042816 5273 Angiosperm View MSA
121350320 5274 Embryophyte View MSA
123381677 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.59487 0.0 19.8044    
cufflinks 8.54491 0.0 30.502    
cufflinks 9.93409 0.0 36.7167    
cufflinks 7.03709 0.0 21.1911    
cufflinks 7.18743 0.0 21.6653    
cufflinks 6.77093 0.0 23.5255    
cufflinks 10.4577 0.0 38.1168    
cufflinks 5.74747 0.0 19.7931   Low
cufflinks 15.1082 0.0 60.1074   High
cufflinks 2.264       Low
cufflinks 5.355        
cufflinks 6.147        
cufflinks 3.418        
cufflinks 2.742       Low
cufflinks 11.722     High High
cufflinks 4.772        
cufflinks 3.871        
cufflinks 5.041        
cufflinks 6.463        
cufflinks 4.17        
cufflinks 5.587        
cufflinks 4.477        
cufflinks 4.334        
cufflinks 5.583        
cufflinks 4.364        
cufflinks 4.513        

0 Strain